Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0520 ATGTCAATGGGTCTGACCTACAGGAGCAAGAAGGCGATCAAAAGAGCTCGGTGCAGGCTCAAGCTACTCAAGAACAAGAGGCAGGCAATAACGAGGCAGTCACGTGAAGATGTCTCTGAGCTTATCAAGTGTGGCCATCAAGAATCTGCCGTCAATCGGGCGGAGCAGCTAATCAAAGATGAAGCTTTATCTGCAGCTTATGAATTGTTAGATAACTTCGGTGAATTTATCCTGAACCAACTCTCCTACATCCGAAGGCACAAGGACTGCCCAAACGACATCAATGAAGCAGTTTCGAGTTTGATATTTGCCTCTGCGAGGATTGGAGATCTTCCTGAGCTTTTTGTCATCAGGAAGCTCTTTGGACAGCGTTATGGCCAGAGGTTCGCAACTACTGCTGTGGAGCTACTTCCTGGGAATCTTGTAAACAGTCAGTTAATAGAGAGCCTCTCATTGAAGTCTGTGGCGGATGATGTAAAGTATAGAGTAGTCGATGAAATAGCTAGAGACCATTGCCTCCAACCAGAGCTTTTGGCTATTGAGTACTACCCTGATTGGCAACAAATGCAGGAGAGAGAAATCAAAGAGTATCAAGTAGAGGAAGATGGTGGCCCAATAAATGCTAAAATTGCAGGACCAGAGATACATGTTTCAGAGATTGAAGAGATTCAGAGAGAAGTCATTTGCGTTGATTCACCTATCAAGAAGTTGTTGTTCAAGCCAACTAGTTCTTGTTTTCTGCGAGAATCTAACGTTGCTGATGCTTCTGCAATAATTTATACTGTTCAGAAATATCTCCCTTATATTCAGAGCTTTCCTTTACACAAGATGGAGAAAGTACAGAACTTCTCCAAGCTCCTTCCTGGTTTAAAAGACACAAGAGAATTGGTAGTATATGACAAGGATATAGAGGAATCTCGGTTTTCTGCAACAAGAAATGGATCCTTTCATCAAATCGATTTGGATAAAATGGAGTCAGAGAGCGACGAGTCAAGCACGAGGAGCTCCAGAAAGAGCAAAAGGGCACATAAGAAAAGAACAAGAAGAAGATCAGCATCACTTGAAAACCAATGCATAATGGATATTGGCTGTTTGATCTATTATCACAAGCCATCCAGAAATACCTCTTCTCCCAGAACTTGCTCTGGCTACCGCTTAAAGCAGCAGAAGCCTTTCATAGAATCATTTCCACAAGCAGGTTATGCGCACAAGAGACTGAAGCAGCATAGCTCCTCAGAAACGGAACAAGATGCCTGTAGCCTGGACTATCCCTGCTATTGCTCTGTTCATGATGACAATACAGCTATACAAAGTGTAGAAAAACCCAATTCGAATAAAGAATCAAAAAAGGGAATGGAATTGTTTTCCGTTCCTCGGAGAGTAGTGTATAATGTAGTCACGTACCCAGATTGTAACAAAACAGAAAAGCAGAAGAATAGAACACCAGAAGCGTATGAAAGATCTGTGACGATGCCCCCAGAGCGCCAAAAAACTCGCAGGGACAAGATGGGGAGGACGTATTCATGTCCACCAGAATATCCGAAGCATGTTCATCCCAGGGTCCTCCGAGTCTTTAGACTCTTGTACCCTGTTCATTTTGATCATCTTCTTCATCTGTCTCCTTCCTCTGCGTACAACACCCAAAAGGTCTCTGTTTCTCAGATGGATAGATTCATCAATGGTGTTGATGGCACTCAAATGAGAGAAAGGGCAGAGTCGAGCTTTCAGGGTCAACAACGGAAGCCAGTTTATGATGAAGCTTCCATGTCTGATAGGCCTGAGCGTCAGATCCTATATGATCCCTCTGTTTCTTTCAACGTGCCTCTACCTTCTTCATCGTCTTCTTCAAGTATCAGATTTTCCTTTGCCCTTGACAACTCTCCCTACCAATCTGCAGCCACAAATCATCAACCCATGAGGTCTTTCGCACTTGATCATCATCATCATCATCAGCAGCAGCAGCATGTTCGCCCATCCCACAGTACTAAGCTATACAGAGGAGTGAGGCAACGCCATTGGGGAAGATGGGTGGCTGAGATTCGTCTTCCTAACAGTAGAAATCGCCTCTGGTTAGGCACTTTTGACACTGCAGAAGATGCTGCTCTGGCTTATGATCGTGAGGCCTTTAAGCTCAGAGGACAGAATGCTAGGCTCAATTTCCCCGACCTCTTTCTCAATAAAGCTCCAAATTCAACTGCTTCTTCTTCTTCCTCAAAGCAGCCTGAACCAGAAGAAGAGATTCATGAGATTCAGGGAACTGCAGAGGAAGAGAAATTGGTATTGGGAGACATGGAGGCTTGGTACAGCGCGATTCCACAAGGTTGGGGACCTGAGAGCCCAGTGTGGGATGATTTAGACACCACCAACAAACTTCTGTTTCAGTCACAGCTTCATTCTGTGAGTCCACAAAAACAGCAAGAGTTTAATGATGTTAATAATAATAATGCTAAGAGACAAGAAGACGAGACAGGACCAGATTATTGTTCCGCTTCCTCCTCTGCTTGTCTCACGAAGCCTTTCTTCTGGAACGATTGA 2535 0.4414 MSMGLTYRSKKAIKRARCRLKLLKNKRQAITRQSREDVSELIKCGHQESAVNRAEQLIKDEALSAAYELLDNFGEFILNQLSYIRRHKDCPNDINEAVSSLIFASARIGDLPELFVIRKLFGQRYGQRFATTAVELLPGNLVNSQLIESLSLKSVADDVKYRVVDEIARDHCLQPELLAIEYYPDWQQMQEREIKEYQVEEDGGPINAKIAGPEIHVSEIEEIQREVICVDSPIKKLLFKPTSSCFLRESNVADASAIIYTVQKYLPYIQSFPLHKMEKVQNFSKLLPGLKDTRELVVYDKDIEESRFSATRNGSFHQIDLDKMESESDESSTRSSRKSKRAHKKRTRRRSASLENQCIMDIGCLIYYHKPSRNTSSPRTCSGYRLKQQKPFIESFPQAGYAHKRLKQHSSSETEQDACSLDYPCYCSVHDDNTAIQSVEKPNSNKESKKGMELFSVPRRVVYNVVTYPDCNKTEKQKNRTPEAYERSVTMPPERQKTRRDKMGRTYSCPPEYPKHVHPRVLRVFRLLYPVHFDHLLHLSPSSAYNTQKVSVSQMDRFINGVDGTQMRERAESSFQGQQRKPVYDEASMSDRPERQILYDPSVSFNVPLPSSSSSSSIRFSFALDNSPYQSAATNHQPMRSFALDHHHHHQQQQHVRPSHSTKLYRGVRQRHWGRWVAEIRLPNSRNRLWLGTFDTAEDAALAYDREAFKLRGQNARLNFPDLFLNKAPNSTASSSSSKQPEPEEEIHEIQGTAEEEKLVLGDMEAWYSAIPQGWGPESPVWDDLDTTNKLLFQSQLHSVSPQKQQEFNDVNNNNAKRQEDETGPDYCSASSSACLTKPFFWND 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0520 844 MobiDBLite consensus disorder prediction 319 336 - -
Lele32g0520 844 MobiDBLite consensus disorder prediction 490 506 - -
Lele32g0520 844 PRINTS Ethylene responsive element binding protein signature 687 703 IPR001471 GO:0003700|GO:0006355
Lele32g0520 844 PRINTS Ethylene responsive element binding protein signature 665 676 IPR001471 GO:0003700|GO:0006355
Lele32g0520 844 MobiDBLite consensus disorder prediction 799 832 - -
Lele32g0520 844 FunFam Vacuolar protein sorting-associated protein IST1 3 181 - -
Lele32g0520 844 MobiDBLite consensus disorder prediction 473 511 - -
Lele32g0520 844 MobiDBLite consensus disorder prediction 729 750 - -
Lele32g0520 844 MobiDBLite consensus disorder prediction 570 589 - -
Lele32g0520 844 MobiDBLite consensus disorder prediction 319 350 - -
Lele32g0520 844 SMART rav1_2 664 727 IPR001471 GO:0003700|GO:0006355
Lele32g0520 844 Pfam AP2 domain 665 713 IPR001471 GO:0003700|GO:0006355
Lele32g0520 844 Pfam Regulator of Vps4 activity in the MVB pathway 10 171 IPR005061 GO:0015031
Lele32g0520 844 PANTHER IST1 FAMILY MEMBER 9 521 IPR005061 GO:0015031
Lele32g0520 844 Gene3D AP2/ERF domain 664 722 IPR036955 GO:0003700|GO:0006355
Lele32g0520 844 ProSiteProfiles AP2/ERF domain profile. 664 721 IPR001471 GO:0003700|GO:0006355
Lele32g0520 844 Coils Coil 13 33 - -
Lele32g0520 844 CDD AP2 663 723 IPR001471 GO:0003700|GO:0006355
Lele32g0520 844 MobiDBLite consensus disorder prediction 799 813 - -
Lele32g0520 844 FunFam Ethylene-responsive transcription factor 2 663 722 - -
Lele32g0520 844 SUPERFAMILY DNA-binding domain 664 722 IPR016177 GO:0003677
Lele32g0520 844 Gene3D - 5 179 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0520 Lele-ChrLele32 3259653 3266426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0520 653 786 AP2-EREBP Transcription Factor Family AT4G28140 59.286 1.23e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele32g0520 Ist1 2e-47 No_clan