Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0513 ATGGGGTGTTGTGTATCTACAAGCAGCCGAAGTACTTGTAGTAGTAGGAGCAATGGCGACACGATCTCTCCATCTTGTTTGGAAGTAGGTTTCTGTGGGCAAAAGAGAACGAGGAGAACATTCTCTGATCATGTCATTGCTCTGCAGAATCTGCCGTCCCTACCTAACCGAATTTTTACCAATGGAAAGAGCCGGACTTCTTGCATATTCACACAGCAAGGCAAAAAGGGTATCAATCAGGATGCCATGATTGTATGGGAAGACTTCATCTCTGAAGATATGATATTTTGTGGTGTCTTTGATGGCCATGGTCCATATGGTCATGTTGTTGCACGCAATGTGAGGGATACCTTGCCGGTAAAACTACTTTCATATTTGCACTCTTGTGAATCAAAGAGAAATGGTTCAGGCTCAGGCAAAGCTTCTTTCAAGGGGAATACCGATGTTGGAGTGTGCGAGAGGGATTGTTCCGCCGAGGATGTAGTGAATTCTGTCTGGAGAGAAGCTTTCATGAAGGCTTATAAGGCAATGGACAAAGAACTTAGGTCCCATCCAAATTTGGACTGCTTCTGTAGTGGCAGCACAGCTGTCACTATAGTGAAGCAGGGTTCGAATCTGTTCATGGGCAACATTGGGGATTCGCGAGCAATCATGGGATCCAAAGACAACAATGATTCCATGGTGGCCATTCAGTTAACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCCGAAAGAATTAAACGGTGCAAAGGCAGAGTATTTGCATTGCAGGATGAGCCCGAGGTTCCCAGAGTGTGGTTGCCTTTCGATGATGCGCCTGGATTAGCGATGGCTCGAGCATTTGGTGATTTCTGCTTGAAGGAGTATGGCGTGATTTCCATACCTGAGTTTTCTCATAGACTGCTTACAGACAGAGATCAGTTCATCGTTCTTGCCTCTGATGGGGTGTGGGATGTGTTAAGCAATGAAGAAGTGGTTGAGATAGTAGCTTCGGCACCGTCTCGTTCATCAGCTGCTAGGATTCTGGTGGATTCTGCGGCTCGGGAGTGGAAGCTTAAGTATCCGACATCAAAGATGGATGACTGTGCTGTTGTGTGCATGTTTTTGGATGGGAAGATGGACTCAGAATCTGATTATGACGAGCCAGGCTTTTCTTCAGCAACCATCCAGAGCAACCATTCTGGCAATCCAGTTGAATCAGACCCCGGCCAGAAGTCCGAGCCATCTCTGCATCGGAACTTCACCGTGAGATCTGCTGATGAAAATGAGACTTACGGAGGACTGCCGGTGGACGTCGTCTTCGAAGATGGAACAACATCATCAGTGGAAGATCAAAACTGGTCAGGTTTGGAAGGTGTAACCCGTGTAAATTCACTGGTCCAGCTTCCTCGATTTTCCGAGGAAAGGCCAAACACTTGA 1422 0.4684 MGCCVSTSSRSTCSSRSNGDTISPSCLEVGFCGQKRTRRTFSDHVIALQNLPSLPNRIFTNGKSRTSCIFTQQGKKGINQDAMIVWEDFISEDMIFCGVFDGHGPYGHVVARNVRDTLPVKLLSYLHSCESKRNGSGSGKASFKGNTDVGVCERDCSAEDVVNSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDNNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVASAPSRSSAARILVDSAAREWKLKYPTSKMDDCAVVCMFLDGKMDSESDYDEPGFSSATIQSNHSGNPVESDPGQKSEPSLHRNFTVRSADENETYGGLPVDVVFEDGTTSSVEDQNWSGLEGVTRVNSLVQLPRFSEERPNT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0513 473 SMART PP2C_4 50 368 IPR001932 -
Lele32g0513 473 MobiDBLite consensus disorder prediction 382 410 - -
Lele32g0513 473 FunFam probable protein phosphatase 2C 52 57 373 - -
Lele32g0513 473 PANTHER PROTEIN PHOSPHATASE 66 368 - -
Lele32g0513 473 CDD PP2Cc 72 370 IPR001932 -
Lele32g0513 473 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Lele32g0513 473 MobiDBLite consensus disorder prediction 378 410 - -
Lele32g0513 473 MobiDBLite consensus disorder prediction 1 20 - -
Lele32g0513 473 Gene3D - 58 378 IPR036457 -
Lele32g0513 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Lele32g0513 473 Pfam Protein phosphatase 2C 141 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0513 Lele-ChrLele32 3210788 3213081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0513 1 473 PP2C-type Phosphatase Gene Family AT1G03590 68.553 0.0 630
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0534 29 3242253 3244574 Lele32g0513 32 3210788 3213081 hybridization
Lele30g0876 30 12694323 12696603 Lele32g0513 32 3210788 3213081 hybridization