Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0506 ATGTCGCAACTTGCAAGTCAGAAAAAGTTGGAATCGTTTCAAAGTTTCAAATCTGATCGTAACAAAAAGGAAGAACGTAAAGGGTTATTCTACTTACGTGCAAGCAATGTAGTAGAGGAAGAGGAGGATAGCTTTGAAAGTCGGAACTGTACGCGTCGGCAAGGAGCGTGGCGCGGTGCTTTCACCGTTTACTGTAGACATTACAAAGGAGATATGTCTGACTTGCACTCTTCTTTTTATAATTGTTTCGTAGAGCGGTTAAGCTCAGAAGAGAGACAGAACCAGTGGCCATACAGAGACGGGGAAAAAAGAGCAAGAAAGATTCACTCTTTCAGAGAATTTCCGAAGTGTGTGTGCCTTTACGGATTTTTCTCTGCCTTTTTCCTGGGCTCCTGCTTTTTCCATAGGTTTTTGCTTGTGGAGTGTGTGCTGAATTCTCTTGATTCATTTTCGTTCATTTTCCCAGCATTTGCTGAAATTTTGAGCTCCTCACTTGCTCTGCGAGTTCATTTTGATCTCGGATTTCGTCCTCACTCTTCAAAGATTGAACTGAGCCGGGGATCAATGGGTGGGATGAGATCTGGTTCTGAGTATAAAGGAGCGAAGATCTATGGACAAGTTTTATTGGGATTCATGTTGATCAGCACGATTCAGTTTTCACTAGCGGACACGAATCCTTCTGACGTTTCTGCAATAAATAACTTATATGCTGCGCTGGGATTTCCTGTTCTCCCCGGGTGGGTTCCAAGTGGGGGAGACCCGTGTGGACAAGCATGGCAAGGCATTCAGTGTAATGGTTCAGATATACAGACAATGTATGATAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCTACATTGACTGAACTGACAGTCATGGAATTTGTCAGCTTTGGCCTCCCTGTGAGTATTTGGTCTTGACAAGATGGAAACCCATTTAATGTTGTTAATGGTACTACAGCTTCAGCCCCTCCATCTCGTTCTCCAGCAACAACATCACCAGGAACTGTGGTTTCTGGTGCCCCGACTACTGGACATGTACCTACTACTAAACCAGCTGAAGGACCAATTGCATCAAAGGAATCAAATTCTGGAAAAGCAAGAAAGAACACCAAAAGGGTGGTTTGGATATCTATTGCAAGTGTATTAGGATTTATTATTTTGGTGTTGGCACTCCTTCTTTTTGCTCCAAGATGTGGCAGAGGGGAAAGGGATGGCAGAAGAATTTCTAAGCAACACCAAATTGGAGCATATGGAGATGACAGACGCAATCATAGGAATCATGGGACTTCCGCCCAACCACCCAGTCAAACTGAGAAAGTACCAAAGGGGACTGTTGTGAGAACAAAAGAAGATCATCAAGCAGAGACCATGAGAGTAGAAGCTATTCCCAGGTCACAAGATGAGCAAGCGAAAGATGTGCGAAGCATGAGAACACTACCCAAGCGGGATGATCATGAGATAGATATGAGAGCACTAGATGTGTACTCACTGCCCCCTCCCCCTCCCCCTGCCCCCCCACCCCCACCCCCACCCCCACCCCCACCACCTGATGAGAAGGTGACTGCTCCTTTCCATCGGGGGGATACAGTCAATCCTTCTGTGAAAAAGCCAGTTTCTCCCACTTTTGCAAAATCTTTCACTATTGCATCCCTTCAACAATATACGAACAGCTTTTCTCAAGAAAACCTTATAGGAGGAGGCATGCTGGGGAATGTGTATAGGGCAGAGCTACCTGATGGGAAGAAACTGGACAAAAGAGCTTCTGAACATCAAAAGGATCATGAATTTCTTGAACTGGTAAACAGTATTGACAGAATCAGGCATGCAAATATTGTTGAGCTTATCGGTTACTGTGCTGAGCATGGCCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGATGCACTGCATTCAGATGATGAGTTCAAAACAAGATTGTCGTGGAATGTTCGCATTCGGATAGCCCTTGGGGCGGCCAGAGCCTTAGAGTATTTGCATGAGATCTGCCAACCACCTGTTGTGCACAGAAATTTCAAGTCTGCCAATATTCTCCTTGATGATGATCTATCTGTGCGTGTTTCCGATTGTGGCTTGGCTCCCTTGATAGCTTCAGCCTCACCAAAATGCTGTTTTGTATTCATCAACTGGAAACCTGACTTTCTCTATGAAATGAGGACACGTTCTCGGGGAGAGCAGTCTCTAGTTAGATGGGCAATTCCTCAACTACATGACATTGATGCCTTATCAAATATGGTAGACCCTTCTCTCAATGGAGACTACCCAGCCAAATCATTGTCCAACTTTGCAGACATTATTTCTCAGTGTGTTCAGTCGGAGCCAGAATTTAGGCCACCTATGTCAGAGGTTGTTCAATATCTACTAGATATGATAAGGAAGGAATCTCACAGAAGTGGATTAAATGAAGACTGA 2448 0.4457 MSQLASQKKLESFQSFKSDRNKKEERKGLFYLRASNVVEEEEDSFESRNCTRRQGAWRGAFTVYCRHYKGDMSDLHSSFYNCFVERLSSEERQNQWPYRDGEKRARKIHSFREFPKCVCLYGFFSAFFLGSCFFHRFLLVECVLNSLDSFSFIFPAFAEILSSSLALRVHFDLGFRPHSSKIELSRGSMGGMRSGSEYKGAKIYGQVLLGFMLISTIQFSLADTNPSDVSAINNLYAALGFPVLPGWVPSGGDPCGQAWQGIQCNGSDIQTMYDNQFTGSIPTSLSTLTELTVMEFVSFGLPVSIWSXQDGNPFNVVNGTTASAPPSRSPATTSPGTVVSGAPTTGHVPTTKPAEGPIASKESNSGKARKNTKRVVWISIASVLGFIILVLALLLFAPRCGRGERDGRRISKQHQIGAYGDDRRNHRNHGTSAQPPSQTEKVPKGTVVRTKEDHQAETMRVEAIPRSQDEQAKDVRSMRTLPKRDDHEIDMRALDVYSLPPPPPPAPPPPPPPPPPPPDEKVTAPFHRGDTVNPSVKKPVSPTFAKSFTIASLQQYTNSFSQENLIGGGMLGNVYRAELPDGKKLDKRASEHQKDHEFLELVNSIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNVRIRIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLIASASPKCCFVFINWKPDFLYEMRTRSRGEQSLVRWAIPQLHDIDALSNMVDPSLNGDYPAKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMIRKESHRSGLNED 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0506 815 Gene3D Transferase(Phosphotransferase) domain 1 725 814 - -
Lele32g0506 815 MobiDBLite consensus disorder prediction 430 444 - -
Lele32g0506 815 Gene3D Transferase(Phosphotransferase) domain 1 633 716 - -
Lele32g0506 815 MobiDBLite consensus disorder prediction 317 347 - -
Lele32g0506 815 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 527 632 - -
Lele32g0506 815 MobiDBLite consensus disorder prediction 402 538 - -
Lele32g0506 815 ProSiteProfiles Protein kinase domain profile. 560 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0506 815 MobiDBLite consensus disorder prediction 402 429 - -
Lele32g0506 815 MobiDBLite consensus disorder prediction 497 522 - -
Lele32g0506 815 MobiDBLite consensus disorder prediction 445 493 - -
Lele32g0506 815 SUPERFAMILY Protein kinase-like (PK-like) 535 799 IPR011009 -
Lele32g0506 815 MobiDBLite consensus disorder prediction 317 366 - -
Lele32g0506 815 Pfam Protein tyrosine and serine/threonine kinase 563 710 IPR001245 GO:0004672|GO:0006468
Lele32g0506 815 Gene3D Phosphorylase Kinase; domain 1 529 632 - -
Lele32g0506 815 SUPERFAMILY Formin homology 2 domain (FH2 domain) 508 517 - -
Lele32g0506 815 PANTHER OS01G0253100 PROTEIN 474 805 IPR045271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0506 Lele-ChrLele32 3164003 3171520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0506 260 811 Strubbelig Receptor Gene Family AT4G03390 48.510 9.60e-154 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele32g0506 PK_Tyr_Ser-Thr 1.7e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele32g0506 32 3164003 3171520 Lele09g0857 09 6868350 6871529 CCT
Lele32g0506 32 3164003 3171520 Lele10g0788 10 6258608 6259357 CCT
Lele32g0506 32 3164003 3171520 Lele11g0867 11 8697295 8697999 CCT
Lele32g0506 32 3164003 3171520 Lele12g0475 12 12721620 12723573 CCT
Lele29g0529 29 3201384 3207569 Lele32g0506 32 3164003 3171520 hybridization
Lele30g0882 30 12732515 12739577 Lele32g0506 32 3164003 3171520 hybridization