Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0495 ATGCGTTGGTCTTCTTTCTACCAGACAGCCTCAAGGGCTTTTCATCAGTCTCCTTCCTGGTCCAAGGTTCTTGTCGTCTGCACTGTCAGTGGGGCAGGTTTAGTGGCATATGCCGATGCAGGAGTAGTTCAGAGTGAGAATGGTGGGGATAGAATCCCGAAGAAGAAGGTGGTGGTGGTGGGAACAGGATGGGCTGGGACCAGTTTTGTGAAGAATTTGAAAAACCCTTCGTATGATGTGGAAGTAGTTTCACCTCGTAACTATTTTGCATTTACGCCTTTGCTTCCAAGTGTCACCATCGGCACTGTGGAATCAAGAAGCATTGTCGAACCTATTCGCAAAATCATCAACAAGAAGAACATAAACGTTCAATTCACACAAGCTGAATGCTTTAAGATCGATGCCAAGAATCGAAAAGTGTACTGTCGTTCTACTGAAGACAGCAAAAATGGCAAACATGAATTTTCCATTGATTATGACTACCTCGTTCTCGCCATGGGAGCCCGTTCCAACACATTTAACACCCCAGGTGTTGAAGAATATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGAGAATCCGTCGGAAAGTGATAGAACTTTTCGAGAAGGCAAGCCTGCCATGTGTACCTGAAGAGGAGAAGAAGAAACTTCTGCATTTTGTGATAGTTGGTGGTGGTCCGACTGGTGTAGAGTTTGCTGCAGAGCTTCATGACCATGTTCATCAGGATTTATACAAACTATATCCTTCTGCCAAAAACTACGTAAAGATTACACTTTTGGAAGCAGGCGATCATATTCTGAACATGTTTGACAAGAGGATTACTGAGTTTGCTGAAGAAAAGTTCAAAAGAGATGGGATCGATGTGAAACTAGGTTCTATGGTTATAAAAGTTGCTGAGAATGAGATCAGTACAAGAGAAAGAGGAACAGATAAGGTTGCATCTTTACCTTACGGTATGGTGGTTTGGTCAACTGGTATTGGTCCTCGTCCTGAAGCTGTTCAGTTTATGAAAGATATTGGTCAGGGTAATAGGCGTGCAATTAGCACTGATGAATGGTTAAGAGTTGAAGGAGCTGACAACATCTACGCCCTCGGAGATTGTGCCACTAAAAATCAACGTAGAGTTATGGAAGATATAGCAGTGATATTTAGCAAGGCAGACAAAGAAAACTTTGGGAAATTGGATCTGGATCAGTTTCAAGAGGTTGTTGGAGACATTACTGAGAGGTACCCACAAGTGGATATTTATCTAAGGAGGAAGCAAATGAGTAGCATAGTGGCCCTAATGAAGAACTCTCAAGACAACAATACTCTAGTGGACATTGAAACATTCAAAGCTTGTCTTTCCGAAGTAGATTCCCAGATGAAAAACCTTCCTGCAACAGCCCAGGTAGCTGCTCAACAAGGTGAGTATCTTGCAGACTGTTTCAATCGAATGGAGCAGTGTGAGAAATATCCTGAGGGACCCCTTAGGTTTAGAGGAACAGGACGTCATCGTTTTCGTCCCTTCAGGTACAAGCATTTGGGGCAATTTGCTCCGTTAGGAGGAGAACAAGCAGCAGCTCAGCTTCCGGGAGATTGGGTCTCAATCGGACATAGCACACAGTGGCTCTGGTATTCTGTATATGCAAGCAAACAAGTGAGCTGGCGTACCAGGTATTTGGTGGTGGCAGATTGGGGGCGACGCGTTATATTCGGCAGGGACTCAAGTGGAATATGA 1725 0.4406 MRWSSFYQTASRAFHQSPSWSKVLVVCTVSGAGLVAYADAGVVQSENGGDRIPKKKVVVVGTGWAGTSFVKNLKNPSYDVEVVSPRNYFAFTPLLPSVTIGTVESRSIVEPIRKIINKKNINVQFTQAECFKIDAKNRKVYCRSTEDSKNGKHEFSIDYDYLVLAMGARSNTFNTPGVEEYTHFLKEVEDAQRIRRKVIELFEKASLPCVPEEEKKKLLHFVIVGGGPTGVEFAAELHDHVHQDLYKLYPSAKNYVKITLLEAGDHILNMFDKRITEFAEEKFKRDGIDVKLGSMVIKVAENEISTRERGTDKVASLPYGMVVWSTGIGPRPEAVQFMKDIGQGNRRAISTDEWLRVEGADNIYALGDCATKNQRRVMEDIAVIFSKADKENFGKLDLDQFQEVVGDITERYPQVDIYLRRKQMSSIVALMKNSQDNNTLVDIETFKACLSEVDSQMKNLPATAQVAAQQGEYLADCFNRMEQCEKYPEGPLRFRGTGRHRFRPFRYKHLGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVVADWGRRVIFGRDSSGI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0495 574 PANTHER NADH DEHYDROGENASE 50 573 IPR045024 GO:0003954|GO:0006116
Lele32g0495 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 422 573 - -
Lele32g0495 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Lele32g0495 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Lele32g0495 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
Lele32g0495 574 Gene3D - 48 405 - -
Lele32g0495 574 Gene3D - 406 573 - -
Lele32g0495 574 SUPERFAMILY FAD/NAD(P)-binding domain 54 272 IPR036188 -
Lele32g0495 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 45 405 - -
Lele32g0495 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 378 IPR023753 GO:0016491
Lele32g0495 574 SUPERFAMILY EF-hand 332 452 IPR011992 -
Lele32g0495 574 SUPERFAMILY FAD/NAD(P)-binding domain 220 374 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0495 Lele-ChrLele32 3098140 3100986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0495 1 574 Chloroplast and Mitochondria Gene Families AT4G21490 68.158 0.0 801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0517 29 3136950 3139833 Lele32g0495 32 3098140 3100986 hybridization
Lele30g0893 30 12801550 12808914 Lele32g0495 32 3098140 3100986 hybridization