Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0479 ATGATGAGAGGTCCTTACTACGACAAGAATGGAGTAAAGAGAGGTGCGTGGAGTAAAGAAGAAGATGAAAGGTTAAGAGCATATGTTGAGAGACACGGCCACAGTAATTGGCGCCAACTCCCCAAACACGCAGGTTTATCAAGGTGCGGAAAGAGTTGCAGACTTCGATGGCTAAATTACCTGCGGCCGGATGTAAAGCGTGGAAATTATACCCAAGAAGAAGAGGAACTCATCATCAAATTACATGAACAATATGGAAATAAATGGTCTTTGATTGCCGAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCACCTAAAGAAGCAGTTGGAGTGCAATCACGGAGGAAAATCTGAGTTAAAAATGAAACCTAGTGTTACTTGTGGGGGAGAAACTAGAAAGTATTTTGAACCTGAAAGCCCTTTGCCTGGTTTAGATGCTGCTTCCTCCAGCAATATCTCAGAAAACTCACTACCCAGCTACACTTCATCTTCAACCTTTTCCTTCGGAGGAGAAAGCGTTGCTGATGCTGCATGGGAAATATTTGAAGAATTCGGAGAATTTTGGAGCCAACCATTTGTCACAGAAAATACATATGACCAGGATGACTACTATTATAGTGTTAACTATGCAGACGTGGACGAATATTCCTCTTACCTCTTTGAGAACGCTGAGTTTTTGTGCCAAGTGATGCAAGAATTTCCTGAAGATCCTACGAAGGATATATAA 747 0.419 MMRGPYYDKNGVKRGAWSKEEDERLRAYVERHGHSNWRQLPKHAGLSRCGKSCRLRWLNYLRPDVKRGNYTQEEEELIIKLHEQYGNKWSLIAERLPGRSDNEIKNHWHSHLKKQLECNHGGKSELKMKPSVTCGGETRKYFEPESPLPGLDAASSSNISENSLPSYTSSSTFSFGGESVADAAWEIFEEFGEFWSQPFVTENTYDQDDYYYSVNYADVDEYSSYLFENAEFLCQVMQEFPEDPTKDI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0479 248 Gene3D - 69 133 - -
Lele32g0479 248 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele32g0479 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele32g0479 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele32g0479 248 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele32g0479 248 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele32g0479 248 SMART sant 13 63 IPR001005 -
Lele32g0479 248 SMART sant 66 114 IPR001005 -
Lele32g0479 248 CDD SANT 16 61 IPR001005 -
Lele32g0479 248 FunFam Transcription factor RAX3 7 67 - -
Lele32g0479 248 Gene3D - 14 66 - -
Lele32g0479 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 152 - -
Lele32g0479 248 CDD SANT 69 112 IPR001005 -
Lele32g0479 248 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele32g0479 248 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0479 Lele-ChrLele32 3001369 3002660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0479 1 125 MYB Transcription Factor Family AT2G31180 64.567 2.39e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele32g0479 Myb_DNA-binding 4.3e-16 CL0123