Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0477 ATGGTGAGAATCCCATACTGCAACCAAAATGGCATCAGGAAAGGAACATGGACGCCAGAAGAAGACATGAAGTTGGTCGCTTATGTTACGAGGTATGGCTGTTGGAATTGGCGACGACTCCCCCAGTTTGCTGGACTGGCAAGGTGTGGAAAGAGTTGCAGGCTTCGGTGGATGAACTATCTAAGACCAGACATCAAAAGAGGGAATTACTCTCCCCAAGAAGACGACACTATCATCAGACTTCAACAAAAACTGGGTAATAGGTGGTCAAAGATTGCTACTTGTTTACCGGGAAGAACTGATAACGAAATAAAAAACCACTGGCACACCAATCTGAAGAAGAGGGTTCAAGAAAACTCAGTTGCGCATGCAGAAGATAATAAAGCCTTCGAGTCAAAGGATCAAATTCCATTTGAAACATCCAGACAAGAGATCAGCGACTCATCAGTCACTATCAGCACAATCACAGCTCCTTCTTCACAATGTGATTCAGTAGCAGGCGAGTCCCAAATCTCAAGTGCCTTCCAAGTGCCTTCCAGTACCGATACTGTTGCTTTCCTCAGTAATGAAGAATATTTGGATGCGTTCGTTGAGACTATGAGTGAAAATTTTTTGACAGAGCCGTACATGGTTGACGTTTCCTACGTCGTCCGTAGTGACGAAGCATTGTTACCCTTGTCCCCGGGATATGAATACGATGCACATCTTTCGGGACACAATGTGTATCACCTTGAAACAAAGAAAACAGAAATTAGAAAAGGTGGTGGGGCTTCATTTCCTGATTGTGTCCCAAGCTCTCAATGTTATGACGATTAA 816 0.44 MVRIPYCNQNGIRKGTWTPEEDMKLVAYVTRYGCWNWRRLPQFAGLARCGKSCRLRWMNYLRPDIKRGNYSPQEDDTIIRLQQKLGNRWSKIATCLPGRTDNEIKNHWHTNLKKRVQENSVAHAEDNKAFESKDQIPFETSRQEISDSSVTISTITAPSSQCDSVAGESQISSAFQVPSSTDTVAFLSNEEYLDAFVETMSENFLTEPYMVDVSYVVRSDEALLPLSPGYEYDAHLSGHNVYHLETKKTEIRKGGGASFPDCVPSSQCYDD 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0477 271 Gene3D - 69 137 - -
Lele32g0477 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele32g0477 271 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele32g0477 271 SMART sant 13 63 IPR001005 -
Lele32g0477 271 SMART sant 66 114 IPR001005 -
Lele32g0477 271 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele32g0477 271 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele32g0477 271 FunFam MYB-related transcription factor 13 66 - -
Lele32g0477 271 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele32g0477 271 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele32g0477 271 Gene3D - 14 66 - -
Lele32g0477 271 CDD SANT 16 61 IPR001005 -
Lele32g0477 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele32g0477 271 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 185 - -
Lele32g0477 271 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0477 Lele-ChrLele32 2982305 2985315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0477 1 139 MYB Transcription Factor Family AT5G60890 61.151 2.09e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele32g0477 Myb_DNA-binding 8.2e-13 CL0123