Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0476 ATGAAGAACCCATGGCGTTTTCTCTCTGTTCTTGTCCTCTGTTTCTCTTTTGGCAGCATACCTTCTCTCGCAACTGATACCATCTCTGCAAATCAAACTCTTTCCGGGGATCAAACTATCATCTCATCAGGTCGTGTCTTCGAATTGGGTTTCTTCAAGCCAGGTAATTCTTCCAACTACTACATAGGCATCTGGTATAAAAAGGTCTCTCAACAGACCGTTGTTTGGGTCGCAAACAGAGACGTCCCTGTCTCCAATAAAAATTCAGCCAAGTTAATTGTATCCAACGGTAATTTGGTTCTCCTCAACGAGTCCCAAATCCCAGTTTGGTCGACAAACTTGACTTCCACCACCTCATATTCTGCTGTAGCTATACTCCTGGATTCTGGGAATCTTGTCCTAAGAGACAAGCTAGAATCTTCAGAAAACTTATGGCAGAGTATTGATAACCCGACCAACACGTTTCTTCCTGGTGGTAAAATTAAACTCAACCAGAAGACAAAACAGCCTCAATATCTCACTTCCTGGAGGAACAATGAAGATCCTGCGACGGGTCTCTTCTCTCTGGAACTTGACCCGAAGGGAACCACCTCGTACTTAATTCTTTGGAACAAGTCTGAACAGTATTGGACTAGTGGTCCTTGGAATGGACAAATTTTCAGCTTGGTCCCTGAAATGAGGGCGAATTTCTTGTATAATTTCACCTTTGTTTCAAACGAGAATGAGAGCTATTTCACTTACTCCATGTATAACACTTCAATTTTATCCCATTTGGTGATGTCAATCTCGGGGCAAATCCAGCAACTCTCATGGCTTGAAAGCAGCCAGCAGTGGAATTTGTTCTGGTCTCAGCCAAGACGACAATGTGAGGTTTATGCTATCTGTGGAGCGTTTGGGAGCTGTAATGAGAATTCCCTGCCGTTTTGTTCTTGTTTGACTGGCTTTAAGCCAAAGTCACAGACTGAATGGGATCTGCAGGATTACTCGGGTGGGTGTGAGAGGAAAGCCAAGTTACAATGTGAGAATCCAAGTTCATCAAATAGGGAGAAAGACGGGTTTTTGGCAATGCCAAACGTGACCTTACCTAATCATGCACAATCTGTAGAAGTAGGGAATGCTGGGGAATGCGAGTCCACCTGCTTGAATAATTGCTACTGCTCCGCTTATGCTTATGACAGTGATGGGTGCTCAATTTGGCAAGGAGATTTAATAAGTCTGCAGCAACTTTCTGATGATGAGAATAATGAGAAAACATTATTTCTAAAAGTTGCAGCTTCTGAGTTTTCAGATGCTAAACACAAAAAGCAAAACATTATTGGTATTGTGGTAGGCTTGGTTGGGGGTATAGGGGTTCTCGTAGCAATTTGTCTCTTTGTGATGATGAGAAGGAAAAAGAGAGGAGTTGGATTAGGAAGGTCGTTGGTGGGTTCATCGATGGCATTTAGGCATTGTGGAGAAATTATTGGTACTGTGGCAGGAATTGTAGGTGGTTTAGGGGCTCTCCTGGCCATTCTGCTGTTTGTGATAATCAGAAGAAGGAGAAGAATTTTTGCAAAAGGAAAATCGGTCGAGGGTTCATTGATGGCATATGGGTACAGAGATTTACAAAATGCAACCAAGAATTTCTCCGAAAAACTAGGAGGAGGAGAATTTGGTTCTGTTTTCAGAGGCACCTTGCCTGATTCCAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGCGTGAAACAATTTCGCTCAGAAGTCAGTACCATAGGTACAGTCCAACATGTTAATCTTGTTCGTCTTCTTGGGTTCTGCTCTGAAGGCAACAGAAAGCTTCTGGTTTATGATTACATGCCAAATGGCTCATTGGATGCCCATCTGTTTCAAGAAGAGAACTCCAAGAAATTAGAATGGAAATTGAGGTACCAAATCGCTATAGGAACAGCGAGAGGACTTAATTACCTCCACGAGAAGAGTAGAGACTACATCATACACTGTGACATAAAGCCAGAAAACATTCTATTAGATTCTGATTTTTGCCCAAAAGTTGCAGACTTTGGCCTTACAAAGCTAGTTGGAATGGAAATCAACAGAATTGTCACAAACATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATTTCTGGTGTGACTATCTCACCAAAAGTTGATGTTTACAGTTATGGAATGATGTTATTCGAATTGGTGTCAGGAAGAAGAAACTCAGAGCCATCTGGCCGAGTGAAGTTCTTTCCTACGTGGGCTGCAAATGTAGTAATCCGAGGAGGTGATGTTCTCGACGTTTTGGATCCTACGTTAGAGCGGAATGCAGACGTTGAGGAGCTGACTAGGATAATAAAACTTGCTTCATGGTGCGTACATGATGAAGAGTCAAACAGGCCATCCATGTGTCAGATAGTTCCAATTCTTGAGGGATTTTTGGATATGAATTTGCCTCCAATTCCAAGATCCCTCCTACTGTTTGATGACAGCTAG 2490 0.4269 MKNPWRFLSVLVLCFSFGSIPSLATDTISANQTLSGDQTIISSGRVFELGFFKPGNSSNYYIGIWYKKVSQQTVVWVANRDVPVSNKNSAKLIVSNGNLVLLNESQIPVWSTNLTSTTSYSAVAILLDSGNLVLRDKLESSENLWQSIDNPTNTFLPGGKIKLNQKTKQPQYLTSWRNNEDPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNTSILSHLVMSISGQIQQLSWLESSQQWNLFWSQPRRQCEVYAICGAFGSCNENSLPFCSCLTGFKPKSQTEWDLQDYSGGCERKAKLQCENPSSSNREKDGFLAMPNVTLPNHAQSVEVGNAGECESTCLNNCYCSAYAYDSDGCSIWQGDLISLQQLSDDENNEKTLFLKVAASEFSDAKHKKQNIIGIVVGLVGGIGVLVAICLFVMMRRKKRGVGLGRSLVGSSMAFRHCGEIIGTVAGIVGGLGALLAILLFVIIRRRRRIFAKGKSVEGSLMAYGYRDLQNATKNFSEKLGGGEFGSVFRGTLPDSSVIAVKKLESISQGVKQFRSEVSTIGTVQHVNLVRLLGFCSEGNRKLLVYDYMPNGSLDAHLFQEENSKKLEWKLRYQIAIGTARGLNYLHEKSRDYIIHCDIKPENILLDSDFCPKVADFGLTKLVGMEINRIVTNMRGTRGYLAPEWISGVTISPKVDVYSYGMMLFELVSGRRNSEPSGRVKFFPTWAANVVIRGGDVLDVLDPTLERNADVEELTRIIKLASWCVHDEESNRPSMCQIVPILEGFLDMNLPPIPRSLLLFDDS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0476 829 PANTHER OS07G0415500 PROTEIN 8 820 - -
Lele32g0476 829 CDD STKc_IRAK 546 811 - -
Lele32g0476 829 PIRSF SRK 2 829 IPR024171 GO:0004674
Lele32g0476 829 Pfam Protein kinase domain 543 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0476 829 Gene3D Phosphorylase Kinase; domain 1 508 614 - -
Lele32g0476 829 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Lele32g0476 829 ProSitePatterns Protein kinases ATP-binding region signature. 546 569 IPR017441 GO:0005524
Lele32g0476 829 SMART blect_4 31 151 IPR001480 -
Lele32g0476 829 FunFam Receptor-like protein kinase 4 508 614 - -
Lele32g0476 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Lele32g0476 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 615 818 - -
Lele32g0476 829 SMART ntp_6 348 423 IPR003609 -
Lele32g0476 829 Gene3D Transferase(Phosphotransferase) domain 1 615 816 - -
Lele32g0476 829 Gene3D - 20 148 IPR036426 -
Lele32g0476 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 216 IPR036426 -
Lele32g0476 829 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Lele32g0476 829 FunFam Serine/threonine-protein kinase 20 148 - -
Lele32g0476 829 CDD B_lectin 31 151 IPR001480 -
Lele32g0476 829 Pfam PAN-like domain 348 405 IPR003609 -
Lele32g0476 829 CDD PAN_AP_plant 337 424 - -
Lele32g0476 829 SMART serkin_6 540 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0476 829 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Lele32g0476 829 Pfam D-mannose binding lectin 73 177 IPR001480 -
Lele32g0476 829 SUPERFAMILY Protein kinase-like (PK-like) 525 821 IPR011009 -
Lele32g0476 829 ProSiteProfiles Protein kinase domain profile. 540 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0476 Lele-ChrLele32 2971960 2974449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0476 491 818 Receptor kinase-like Gene Family AT5G20050 38.630 9.64e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele32g0476 Pkinase 1.6e-47 CL0016