Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0474 ATGGAGAACCACCTATTGTGCTTTCTCTCTGTTCTTCTCCTCTGTTCCTCTTTTCCCAGCATACCTTCTCAAGCTGCTGATACCATCTCTGCAAATCAAACTCTTTCCGGGGATCAAACTATCGTCTCATCAGGTGGTGTCTTCGAATTGGGTTTCTTCAAGCCAGGTAATTCTTCAAACTACTACATAGGCATCTGGTATAAAAAGGTCTCTCAACCGACCTTTGTTTGGGTCGCGAACAGAGACGTCCCTGTCTCTAATAAAAATTCAGCCAAGTTAATTGTATCCAACGGTAATTTGGTTCTCCTCAACGAGTCCCAAATCCCAGTTTGGTCGACAAATTTGACTTCCACCACCTCGAAGTCTGTGGTTGCCGTCCTCCTGGATTCTGGGAATCTCGTCCTAAGAGACAAACCGGAATCTTCAGAAAACTTGTGGCAGAGTTTTGATAACCCGACCGACACGTGGCTTCCTGGAGGTAAAATTAAACTCGACAATAAGACAAAAAAGCCTCAATATCTTACTTCCTGGAAGAACAATGCAGATCCTGCGACGGGTCTCTTCTCTCTGGAGCTTGACCCGAAGGGAACCACCTCGTACTTAATTCTTTGGAACAAGTCTGAACAGTATTGGACAAGTGGCCCTTGGAATGGCCAAATTTTCAGCTTGGTCCCCGAAATGAGAGCGAATTTCTTGTACAATTTCACCTTTGTTTCAAACGAGAACGAGAGCTATTTCACTTACTCCATGTATAACTCTTCTGTTATATCTCGTTTCGTGATGTCAATCTCGGGACAGATCCAGCAACTCTCATGGCTAGAAAGTAGCCGGCAGTGGAATTTGTTTTGGTCTCAGCCAAGACGACAGTGTGAGGTTTATGCTATTTGTGGCTCATTTGGGAGCTGCAATGAGAATTCCCAGCCGTTTTGTACTTGCTTGACTGGTTTCGAGCCAAAGTCACAAACTGATTGGGATCTGCAGGATCACTCAAGTGGTTGCGTGAGGAAAACCAAGTTGCAATGTGAGAATCCAAGATCGTCTAACAGAGAGAAAGATAGATTTTTGGCCATGCCAAACGTGGCCTTACCTAAACATTCACAATCTGTAGGTGTAGGGAATGCTGATGAATGCGAATCCACGTGCTTGAACAATTGCTCTTGCGCTGCTTATGCTTATGACGCTAACGCTTGTTCTGTTTGGAATGGAGATTTATTAAGTCTGCAGCAACTTTCTCAAGATGATAGTAATGGAGAAACTTTATATCTAAAACTTGCAGCTTCTGAGTTTTCTGATACTAAACGGAAAACTGGAGAAATTATTGGTATTGTGGTGGGCACTGTAGGGGGTTTAGGGGTTCTCCTGGCCATTCTGCTGTTTGTGATAATCAGAAGAAGGAGAAGAATTGTTGGAAAAGGAAAATCGGTGGAGGGTTCATTGATGGCATTCGGATACAGAGATTTACAAAATGCGACGAAGAATTTCTCTGAAAAACTAGGAGGAGGAGGTTTTGGTTCTGTTTTCAAAGGCACATTGTCGGATTCCAGTGTCGTAGCAGTGAAGAAGCTTGAAAGCATAAGCCAGGGTGAGAAACAGTTTCGATCAGAAGTCAGTACCATAGGCACAGTTCAACATGTTAATCTTGTTCGTCTTCGTGGGTTCTGCTCTGAAGGCAACAGAAAGCTTCTGGTTTATGATTACATGCCAAATGGCTCATTGAATGCCCATCTGTTTCAAGAAAAGAACTCCAAGAGATTAGAATGGAAATTGAGGTACCAAATTGCCCTAGGAATAGCGAGGGGACTAACTTATCTCCACGAGAAGTGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAAAACATCCTTTTAGATTCTGATTTTTGCCCAAAAGTTGCAGACTTTGGCCTGGCAAAGCTAGTTGGAAGGGATTTCAGCAGAGTTCTCACAACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATTTCTGGTGTGGCTATCACAGCAAAAGCTGATGTTTACAGCTACGGAATGATGCTTTTTGAATTTGTGTCAGGTAGGAGGAATTCTGAGGCATCTGAAGATGGCCAAGTGAAGTTCTTTCCTACATGGGCTGCAAATGTAGTAATCCAAGGAGGCGATGTTCTTGACCTTTTGGATCCTGCATTGGAGCGGAATGCAGACATAGAGGAGCTGACTAGGATAATAAAACTAGCTTCATGGTGCGTACAAGATGAAGAGAGTCACAGGCCATCCATGGGTCAGATAGTTCAAATACTTGAGGGTGTTTTGGATGTGAATTTGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGTTGATAACCAGGAGAACATAGTTTTCTTCACTGATTCAAGCTCCAACCAGAGTTCACAGACAAGAAGCAACACCTCAGCAGTATCTGGTCAAGCCAAAAGCAACATCTCATCGACAAGCTCCAAGTCCTCGAGAGAAAATTAG 2484 0.4368 MENHLLCFLSVLLLCSSFPSIPSQAADTISANQTLSGDQTIVSSGGVFELGFFKPGNSSNYYIGIWYKKVSQPTFVWVANRDVPVSNKNSAKLIVSNGNLVLLNESQIPVWSTNLTSTTSKSVVAVLLDSGNLVLRDKPESSENLWQSFDNPTDTWLPGGKIKLDNKTKKPQYLTSWKNNADPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNSSVISRFVMSISGQIQQLSWLESSRQWNLFWSQPRRQCEVYAICGSFGSCNENSQPFCTCLTGFEPKSQTDWDLQDHSSGCVRKTKLQCENPRSSNREKDRFLAMPNVALPKHSQSVGVGNADECESTCLNNCSCAAYAYDANACSVWNGDLLSLQQLSQDDSNGETLYLKLAASEFSDTKRKTGEIIGIVVGTVGGLGVLLAILLFVIIRRRRRIVGKGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLSDSSVVAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGNRKLLVYDYMPNGSLNAHLFQEKNSKRLEWKLRYQIALGIARGLTYLHEKCRDCIIHCDIKPENILLDSDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVKFFPTWAANVVIQGGDVLDLLDPALERNADIEELTRIIKLASWCVQDEESHRPSMGQIVQILEGVLDVNLPPIPRSLQVFVDNQENIVFFTDSSSNQSSQTRSNTSAVSGQAKSNISSTSSKSSREN 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0474 827 SUPERFAMILY Protein kinase-like (PK-like) 477 799 IPR011009 -
Lele32g0474 827 SMART serkin_6 492 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0474 827 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Lele32g0474 827 Pfam Protein kinase domain 495 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0474 827 Pfam D-mannose binding lectin 74 178 IPR001480 -
Lele32g0474 827 CDD PAN_AP_plant 337 425 - -
Lele32g0474 827 PIRSF SRK 1 816 IPR024171 GO:0004674
Lele32g0474 827 SMART ntp_6 349 424 IPR003609 -
Lele32g0474 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Lele32g0474 827 CDD STKc_IRAK 498 764 - -
Lele32g0474 827 Gene3D Transferase(Phosphotransferase) domain 1 567 770 - -
Lele32g0474 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lele32g0474 827 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Lele32g0474 827 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524
Lele32g0474 827 ProSiteProfiles PAN/Apple domain profile. 341 425 IPR003609 -
Lele32g0474 827 Gene3D Phosphorylase Kinase; domain 1 460 566 - -
Lele32g0474 827 ProSiteProfiles Protein kinase domain profile. 492 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0474 827 FunFam Serine/threonine-protein kinase 567 770 - -
Lele32g0474 827 SUPERFAMILY Hairpin loop containing domain-like 352 413 - -
Lele32g0474 827 PANTHER OS07G0415500 PROTEIN 8 774 - -
Lele32g0474 827 Pfam PAN-like domain 349 406 IPR003609 -
Lele32g0474 827 SMART blect_4 32 152 IPR001480 -
Lele32g0474 827 MobiDBLite consensus disorder prediction 792 827 - -
Lele32g0474 827 CDD B_lectin 32 152 IPR001480 -
Lele32g0474 827 FunFam Serine/threonine-protein kinase 21 149 - -
Lele32g0474 827 FunFam Serine/threonine-protein kinase 459 566 - -
Lele32g0474 827 Gene3D - 21 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0474 Lele-ChrLele32 2955772 2958255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0474 450 772 Receptor kinase-like Gene Family AT5G20050 41.341 9.49e-80 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele32g0474 Pkinase 1.7e-50 CL0016