Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0472 ATGAAGAACTGCGAGCTGTGCAGGACTCCGGCAAGAACCTACTGTGAATCGGACCGGGCTAGTTTATGTTGGCACTGCGATGCCAAGGTTCACGGAGCTAATTTCTTGGTTGCCCGGCATTCCAGGACCCTTCTATGTCATGCGTGCCAGTCTCCAACGCCATGGAAAGCCTCCGGTGCCGTCCTCGGAAACACCGTTTCGGTTTGCCGGAACTGTGACGGAGGGGTGAACTTAAGCGGTGACGACGGCGAGGAAAGCGAAGGTGGCAATGACAACGAAATAAACTCGGAAGACGATGACGACGAGGACATGCTAGGCGAAAACAACGACGATAACGCCGATGGCGATGAGGGAGGCGGTGATGTGGAGGCAGATCATCAAATAGTCCCTTGGTCCTCCAGGACGCCCCCACCGCCGGCAAGTTCTTCAAGCAGCGAGGAGTCTAATAACGGCAATAGAAATGCATCTGCATTAGGAGCAACAGCTTCCTTGAAACGAAGGCGTGCAAATGCATCCAATCATAATTCACAGTTATATTGGCACAATGACAAAACAGGTATGCTGGGTTATGGAACAAGCGGTGAGGGTTACCACGTTTTAGAATGGGTAGTTTTCATGAAGTCACGCATAATCAAAATCAAAGGAAAATGGCAATTGCATGGAATAAACAGGAAAGGAGAGAATGAAAAGCAGGGTGGTAGTGGGGCTGAGTGGTTCATGTGGTGCAGAATTGTTAGGGAGCGTAAAGGCGAGGATGAATGA 762 0.5039 MKNCELCRTPARTYCESDRASLCWHCDAKVHGANFLVARHSRTLLCHACQSPTPWKASGAVLGNTVSVCRNCDGGVNLSGDDGEESEGGNDNEINSEDDDDEDMLGENNDDNADGDEGGGDVEADHQIVPWSSRTPPPPASSSSSEESNNGNRNASALGATASLKRRRANASNHNSQLYWHNDKTGMLGYGTSGEGYHVLEWVVFMKSRIIKIKGKWQLHGINRKGENEKQGGSGAEWFMWCRIVRERKGEDE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0472 253 MobiDBLite consensus disorder prediction 138 155 - -
Lele32g0472 253 CDD Bbox1_BBX-like 4 45 - -
Lele32g0472 253 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 178 - -
Lele32g0472 253 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Lele32g0472 253 MobiDBLite consensus disorder prediction 78 155 - -
Lele32g0472 253 MobiDBLite consensus disorder prediction 84 118 - -
Lele32g0472 253 SMART bboxneu5 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0472 Lele-ChrLele32 2946313 2948702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0472 2 140 C2C2-CO-like Transcription Factor Family AT4G27310 46.341 1.12e-32 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0900 11 9262193 9263579 Lele32g0472 32 2946313 2948702 CCT
Lele12g0328 12 3293662 3294401 Lele32g0472 32 2946313 2948702 CCT
Lele29g0497 29 2999917 3002013 Lele32g0472 32 2946313 2948702 hybridization
Lele30g0913 30 12926396 12928813 Lele32g0472 32 2946313 2948702 hybridization