Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0470 ATGATACCTGTTGCTCTGCTTTGTTCTCTTTTACTCTGTCTTCCTACGCCCTGCTTAGCCAGCGATACTCTGAAGATCGGTGAAAGCTTTACTGACAGGGAAGATGGCCTTGTGTCAACAGGAAAGATGTTTGAACTGGGTTTCTTTTCCCCTGCTGGAAGCCAAAACAGATACCTAGGAATATGGTATCATCAGATAGAACGAACAGTTGTCTGGGTTGCTAACAGAGACCACCCCATTCCTGATTCTACTGGAATTTTTCAAATTTCGCAAGATGGTAATCTCACAGTGTCAGGTACAGATGGAAATCCTTATTGGTCTTACAGACCTGAACACGTATCTTCTCTCGAAAACCTGACGGTGACGCTTATGGATTCTGGCAACTTAATTCTAGGAGACGCCCAATTACAGAGGACCTACTGGCAAAGCTTCCAACACCCTACGGACACATTTTTGCTGGGCATGAAAATGGATGAACATATAGTCTTAAATTCTTGGAGAGCTTCTGGTGATCCCAGGAGTGGGAAATATACGTTTGCAGGTGGAAAAATAGGGGATATCAACTATACAATCTACGTCAACCAGAGCCAAGTTTACTGGGCAGGTGAAACACTCCAAGATTTCTCGGAAGGAAAAATACTTTTTCTGTTGACGAACTCCACCCAAAGGTCTTCTACTTTTAAAAACAGAAACATGTCAACAATTTCACCTCCTTCTTTTGTGTTTGCAAGGCTAGTGATGAATTATACAGGGCAGATACAGCTTTGGAGCTGGGTTGAGGTCGGAGGATGGATTCCCGCATGGAATGAGCCAGATAATAATTGCAAGAAACATAACTTCTGTGGGAACTTCGGCAGTTGCAATATTAAAAGTTCGCCACCCTGTAGATGTTTGCCTGGATTCACTCCTAAGTCGCTGGGGGAGAATCAGATTCCGTCATCTGAATCTGGAGGGTGTTTCAGAAAAAAGACGTCATGCGGGCAAAACACGACAACATTCATAGACTTGAAGAAGGTGAAAGTGAGAAAACCAGACAAAAAAGTCTACGCAGCGAACGAAACAGAGTGCCGATCTAAGTGCCTGAATGGGTGCCCCACTTGCACCGCTTATTCATATGATGCATCAACAGATATCTATAATAGGGTGTTCTCACCATGTTCTATATGGACTTCTGATTTACCTACAATTCAAGAAGAGAATGATCTGGGCTTTAATCTTTCAGTCCTGGTAAATAAACCAGATATAGAACCAACTTCAAGAACGTGCAAACCTTGCGGTGCATTCACAATTCCTTATCCGCTGAGCACTGAACCAAGTTGTGGTGATCCCATGTACTTCAATTTCAAATGCTACTCGCCAACCGGGCAGGTTAGTTTCGCTGTAGGAGAAGAGAGTTATATAGTTACTAATATTGATCCAGGCAAGAGATCGTTCTCTATTCAAATCAATGGTTCGGAGGATTGTTCTGCAAGCAATCTCGGGCATCAGCTTCGTCCGCCATTTAGTGCGACTCAACAATGCAATGATGGTGACGAAGTAAAACCACTAGAGATTAATTGGTCTCCCCCACGTGAACCTCCCTGTAATAACTCCATAGACTGCGAGGACTGGTCTCATTCAACTTGCAAAGCAACTATAGATGGAAATGGAAGATGCCTCTGCGATAAAAAATATCAATGGGATGGCCTCAATTTAAGCTGTACGCAAGGGCCTCCAAGAAACAGCTCTAAAGTTTTGATATTAGCGGTGACATTTTCAAGCTTGATTTTCTTGGCCTGCATTATAACTTCTGCTTACATCTGGAGAAGAAAAGTAGCCTTTAAGCAAGAAAAGGCACAAAATCAAAGAATGAGACAGAGCCTACAAGACAGTGAGAGATACATCAAAGAATTCATGGACGCCGAGAGGTTAGGGGAAAATGACAGTGAAGGAATAGAGGTTCCTTATTTGGATTTGAATATCATCCTATTAGCCACAGATAACTTCTCAGATGCTAACAAGCTTGGACGTGGGGGTTATGGACCAGTCTACAAGGGCAAGCTTCAAGGAGGTCAAGATATTGCTGTGAAGAGGCTTTCAAGTGTTTCTTCACAAGGACTCAGGGAATTCAAGAATGAAGTTTTGCTGATATCCAAACTTCAACATCGAAACCTTGTTAGACTTAAGGGCTATTGCATTACAGGAGAAGAAAAAATATTGCTTTATGAATACATGCCAAACAAGAGCTTAGACACATTCTTATTCGATTGTACACAAAGAGTGATTTTGGATTGGCCAATGCGTTTTGACATAATTCTAGGAGTTGCTAGAGGGATGTTATATCTTCATCAAGACTCTAGATTGAGGGTGATTCATAGAGATTTGAAAACTAGTAATATTCTTTTGGACGAGGAGATGCAGCCAAAAATTTCAGATTTTGGGCTCGCAAAAATATTTGGAGCCAAGGAAATTGAGGCTAACACTGAGAGAGTAGTTGGGACTTATGGATATCTAGCCCCAGAGTATGCATTGGATGGATTTTTCTCTATTAAATCAGATGTTTTTAGCTTTGGTGTTGTAATGCTTGAAATTATCAGTGGAAAGAAGAACACGGGATTCTTTCAATCCAAACAAACTTCTAGCCTTCTGGGTTATGCATGGAGGCTATGGGCAGAGAATAACTTGATGGATTTAATGGATCGAAGTTTGAATGAAAGCTGCAACGCAAATCAGTTCATAAAGTGTGCACAAGTGAGTCTTCTGTGCGTACAAGATGAACCAGGAGAGAGGCCCAGCATGTCGCAAGTAATGATAATGCTTGAAAGTGAGACTGCAAGCCTCCCAACTCCAAAGCAACCAACATTTTTTATGAGCAGTTGCAGGGGCATTTATAGCTCTGCTTCTTCTTCAAGTAAACCTGAAGGAATTCTTCCAACTGATACTACCTATCAAGAAGGTCGGTAG 2943 0.4186 MIPVALLCSLLLCLPTPCLASDTLKIGESFTDREDGLVSTGKMFELGFFSPAGSQNRYLGIWYHQIERTVVWVANRDHPIPDSTGIFQISQDGNLTVSGTDGNPYWSYRPEHVSSLENLTVTLMDSGNLILGDAQLQRTYWQSFQHPTDTFLLGMKMDEHIVLNSWRASGDPRSGKYTFAGGKIGDINYTIYVNQSQVYWAGETLQDFSEGKILFLLTNSTQRSSTFKNRNMSTISPPSFVFARLVMNYTGQIQLWSWVEVGGWIPAWNEPDNNCKKHNFCGNFGSCNIKSSPPCRCLPGFTPKSLGENQIPSSESGGCFRKKTSCGQNTTTFIDLKKVKVRKPDKKVYAANETECRSKCLNGCPTCTAYSYDASTDIYNRVFSPCSIWTSDLPTIQEENDLGFNLSVLVNKPDIEPTSRTCKPCGAFTIPYPLSTEPSCGDPMYFNFKCYSPTGQVSFAVGEESYIVTNIDPGKRSFSIQINGSEDCSASNLGHQLRPPFSATQQCNDGDEVKPLEINWSPPREPPCNNSIDCEDWSHSTCKATIDGNGRCLCDKKYQWDGLNLSCTQGPPRNSSKVLILAVTFSSLIFLACIITSAYIWRRKVAFKQEKAQNQRMRQSLQDSERYIKEFMDAERLGENDSEGIEVPYLDLNIILLATDNFSDANKLGRGGYGPVYKGKLQGGQDIAVKRLSSVSSQGLREFKNEVLLISKLQHRNLVRLKGYCITGEEKILLYEYMPNKSLDTFLFDCTQRVILDWPMRFDIILGVARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLAKIFGAKEIEANTERVVGTYGYLAPEYALDGFFSIKSDVFSFGVVMLEIISGKKNTGFFQSKQTSSLLGYAWRLWAENNLMDLMDRSLNESCNANQFIKCAQVSLLCVQDEPGERPSMSQVMIMLESETASLPTPKQPTFFMSSCRGIYSSASSSSKPEGILPTDTTYQEGR 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0470 980 MobiDBLite consensus disorder prediction 958 980 - -
Lele32g0470 980 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 106 958 - -
Lele32g0470 980 SMART ntp_6 328 410 IPR003609 -
Lele32g0470 980 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0470 980 ProSiteProfiles Bulb-type lectin domain profile. 21 144 IPR001480 -
Lele32g0470 980 SUPERFAMILY Protein kinase-like (PK-like) 645 961 IPR011009 -
Lele32g0470 980 Pfam S-locus glycoprotein domain 226 305 IPR000858 GO:0048544
Lele32g0470 980 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 738 941 - -
Lele32g0470 980 Gene3D Phosphorylase Kinase; domain 1 629 737 - -
Lele32g0470 980 Pfam PAN-like domain 326 393 IPR003609 -
Lele32g0470 980 ProSiteProfiles Protein kinase domain profile. 662 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0470 980 CDD B_lectin 37 147 IPR001480 -
Lele32g0470 980 ProSiteProfiles PAN/Apple domain profile. 326 422 IPR003609 -
Lele32g0470 980 Pfam Protein tyrosine and serine/threonine kinase 666 930 IPR001245 GO:0004672|GO:0006468
Lele32g0470 980 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 627 737 - -
Lele32g0470 980 Pfam D-mannose binding lectin 69 158 IPR001480 -
Lele32g0470 980 Gene3D - 18 145 IPR036426 -
Lele32g0470 980 CDD STKc_IRAK 668 934 - -
Lele32g0470 980 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 144 - -
Lele32g0470 980 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 204 IPR036426 -
Lele32g0470 980 Gene3D Transferase(Phosphotransferase) domain 1 738 944 - -
Lele32g0470 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Lele32g0470 980 SMART blect_4 21 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0470 Lele-ChrLele32 2939212 2943155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0470 650 956 Receptor kinase-like Gene Family AT4G23140 55.591 4.66e-121 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele32g0470 PK_Tyr_Ser-Thr 3.7e-46 CL0016