Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0466 ATGAGGAACACAAGGAAGATAATGCTCAACCGGTCTGCAAATCACATGCTGCCAGTATTCTTTTTGCATGCATTGTTTTTCACTTGTATGCATAGCTCTGCTAGGGATGCCATAAGCATTAACACTTTCTTAAGTGATAGGGAAGGGGATGTTCTTATATCCGCCGGAGAAAGATTTGAACTTGGATTCTTTACCCCTAATGGAAGCTCTGGTAGTGGAAGATATGTGGGAATATGGTACTACAAGTCAAATCCACTTACAGTTGTGTGGGTTGCTAACAGAGACAATCCACTTTCTGGTGCTGGGGGTGTTATTGCCATATCTGAGGTTGGCAATCTCAGAGTTTTGGATGGAAGTGGGAAATCTTACTGGGGTACAAATCTTGAGATGCCATCTTCAGCGCACAGGACGGTTAAGCTAATGGATAGTGGAAATCTTATTATAAGCGATGAAGAACAAGGAAGTCACTCAGTGAAAATTGTCTGGCAGAGTTTTGCAAATCCAACTGATACATTTCTCCCAGAAATGAAAATGGATGAAAATTTGGTGCTAACTTCTTGGAGAAGTCATGATGATCCGGCGCCAGGGAACTTCTCATTTCGGCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCTATCAGGTATTGGAAAAGCAGTGCGAAAGGTACATTTTTTGGGTCAGGTGACATATCTTCTGTAATATCTTACTTATTGTCGAATTTCACCCAGAGAATATCTCCAAATAACTCTGTACCCTTTCTTACTTCATCTCTGTATGCCGACACAAGGCTGGTTATGACATACTCTGGTCAGCTTCAGTATTTGAAGATGGATTCACATAAAGTTTGGTACCTGATTTGGGCAGAGCCACGAGATAGATGCAGCGTGTATAATGCTTGTGGTAACTTTGGCAGCTGCAATAGTAAGTACGATTTTATGTGCAAATGTTTACCTGGGTTCACGCCTAACTCTCCGGAAAGTTGGGATTCCGGCGACTTCTCAGGTGGATGCAGAAGGAAAACAAATGTGTGCAGAGAGAACGCTGAGAGTGACACGTTTTTGAGTTTAAAAATGATGAAAGTAGGAAGCCCGGATGCTCAATTTAATGCTAAGAATGAAGTGGAATGCAAGTTAGAATGCCTTAACAATTGCCAGTGCTATGCATATTCATATCAAGATCCTAAAATCACAAGGCGGGCTGCTAGTGGTGACGCAGTGTGCTGGATTTGGACTGAAGACTTGAACAATCTTCAAGAGGAGTATGAGAATGGATGTGATCTCAATGTACGCGTGGCATATTATGATATAGTTCATAGAAAAGAAAGTTCATATTCCTTTTCTTCAAGCTTCATTCAATCTCCTTTTGCAGCATCCAATTGCAGGACCTGTAGGACTTGTGGCACAAACTTCATTCCATATCCACTTAGCACAGGACCACGTTGTGGCGATCCCATGTACTTCAGTTTTCACTGTAACTTCACTACAGGAGAACTTAACTTTGAAACTCCTGGGGGAACTTATCAAGTGATAAGCATAACACCTGAAACGCAAAAATTCATGATCCACAGCAGAGACATAGTTGATTGTAAGGGTCAAAGTTTGACGGACAAGCTTTTGCGTTTAAACCAGTCATCTCCATTTCATCTCACTGGCAGGTGCAATGCTGACCCAGGCACCCGTAATCCAATTGCTCCTGCGAAACTTGGTGGGGAAATAGAAATGAGCTGGGATCCACCATTGGAGCCACTTTGTCGTTTTCTTTCAGACTGTAAGGACTGGCCAAATTCAATTTGCAATACTTCCAGAGATGGGCAAAAGAGATGTCTTTGCAAAACAAATTTTCTTTGGGGTGGCTTGAGTTTAAATTGTACCATTGATGGCAGCCGTAGCAATCAAACAGGCAGGCGTTTGTCTGTTCCTTTGATTATTGCAGTCACTTTCACTATTGTGATTGTGTTAATTCTTCTATCAAGTACCGTTGCCTATGTTTACTTTTGGAGGAGAAGGCTGATCAAGACAAAAGAAATTATGGGGTATGTTAAGAAAAATTCAGCGAGGAGCCTGTATGACAGTGGATATGTCAAAGATTTGATTGAATCGGGAAGGTTCAAAGAAGATGATGGGCATTCCATAGATATCCCACATTTTCATTTGGAAAGCATACTTGATGCTACCAATAAGTTTTCAAACGCAAACAAGCTTGGACAAGGAGGATTTGGTCCTGTCTATAAGGGAAAGTTTCCAGGAGGACAAGAGATAGCAGTAAAGAGACTCTCGAGTTGCTCTGGGCAAGGTTTAGAAGAATTCAAAAATGAAGTGGTATTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGGCTTCTCGGTTATTGTGTTGAAGGAGATGAAAAAATGTTAGTGTATGAATATATGCCGAATAGGAGTCTAGATTCTTTCATATTTGGTAAGATTATTTCACACATTCTGTTTTTTTGGATAAACGTACATTTCATATTTGGAAATTCTTGTTGGACAAGCACTAACATGCCATGCTCCCAATTGTACTGTAATATCCAAGACTTGAAGTCATCTGTCGTATTAGATTGGGGCAAGCGTTTCAAGATTATTTTGGGGATTGCTCGAGGGCTTCTTTACCTTCATCAAGACTCAAGGCTAAGAATCATTCATAGAGACTTGAAAACAAGCAACATTCTACTAGATGAAGAGATGAACCCTAAAATCTCAGATTTTGGCTTAGCTAGGATCTTTGGAGGAAAAGAAACTGCAACGAACACAAACAGAGTGGTTGGAACTTATGGCTATATGTCTCCAGAATATGCTCTAGACGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTCGGTGTGGTGGTGCTTGAGATTCTTAGTGGAAAAAGGAACATGGGATTTTACCAGGCAGATCATGAATTGAGTCTTTTAGGCTATGCGTGGCATTTATGGAAAGTAGAGAGAGCACTGGATTTTATGGATCAGACACTATCTAAGACGTGTAAGACAGATGAATATTTGAAGTGTGTAAATGTTGGGCTGTTGTGCGTACAAGAAGATCCAAATGATCGTCCCACCATGTCCAGTGTAGTTTTCATGGTTGGAAGTGATTCCAGTACTCTTCCAACTCCCAAGCAGCCAGCTTTTGTTCTTAGAAGATGCCCTTCTAGCAGAGCTTCTACTACCAGTAAACTGGAATCTTGTTCTCATAATGAATTGACTGTCACTTTAGAAAACGGTAGGATGGCTTTGACCAAGCAGAATGAGGGGAAGGCGAATGCCTTGACATTTGGGGATGCAATGTGGAAGCATTGTGTTCATATTGCGGAAGTCACATTCTTGTTCTTAATTATCCCCACTACCAAGGAAGGTGGGAAGAAAACCAGGGAGGCCATTATTTCTGCAGATTATCGGTATACCACCTTGCAGAGAGCGTCATCGTCAATGGCGGGGAAGATTGGGTTTGAAGACTTGCTGCCTGTGATGGCGAATAAACTTGGAGGAGAGGGTCTGATAAAGGAGCTGTGTAATGGGTTTGAGTTGCTGATGGACAAAGAGAAAGGGGTCATCACTTTGGATAGCTTGAGGAGAAACTCTGCTCTTCTGGGTCTGCAGGACTTGAAGGAGGATGAGCTCGTGAGCATGATGAAGGAAGGCGATCTCGACGGCGACGGTGCTCTCTCTCAGATGGAGTTCTGCGTTCTCATGTTCAGACTAAGCCCTGATTTGATGGATCAATCTTGGGTTTTGCTCCAAGATGAACTCGATCATCTAGCTTCCAGATGA 3804 0.418 MRNTRKIMLNRSANHMLPVFFLHALFFTCMHSSARDAISINTFLSDREGDVLISAGERFELGFFTPNGSSGSGRYVGIWYYKSNPLTVVWVANRDNPLSGAGGVIAISEVGNLRVLDGSGKSYWGTNLEMPSSAHRTVKLMDSGNLIISDEEQGSHSVKIVWQSFANPTDTFLPEMKMDENLVLTSWRSHDDPAPGNFSFRQDQGENQYIIWKRSIRYWKSSAKGTFFGSGDISSVISYLLSNFTQRISPNNSVPFLTSSLYADTRLVMTYSGQLQYLKMDSHKVWYLIWAEPRDRCSVYNACGNFGSCNSKYDFMCKCLPGFTPNSPESWDSGDFSGGCRRKTNVCRENAESDTFLSLKMMKVGSPDAQFNAKNEVECKLECLNNCQCYAYSYQDPKITRRAASGDAVCWIWTEDLNNLQEEYENGCDLNVRVAYYDIVHRKESSYSFSSSFIQSPFAASNCRTCRTCGTNFIPYPLSTGPRCGDPMYFSFHCNFTTGELNFETPGGTYQVISITPETQKFMIHSRDIVDCKGQSLTDKLLRLNQSSPFHLTGRCNADPGTRNPIAPAKLGGEIEMSWDPPLEPLCRFLSDCKDWPNSICNTSRDGQKRCLCKTNFLWGGLSLNCTIDGSRSNQTGRRLSVPLIIAVTFTIVIVLILLSSTVAYVYFWRRRLIKTKEIMGYVKKNSARSLYDSGYVKDLIESGRFKEDDGHSIDIPHFHLESILDATNKFSNANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDSFIFGKIISHILFFWINVHFIFGNSCWTSTNMPCSQLYCNIQDLKSSVVLDWGKRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNMGFYQADHELSLLGYAWHLWKVERALDFMDQTLSKTCKTDEYLKCVNVGLLCVQEDPNDRPTMSSVVFMVGSDSSTLPTPKQPAFVLRRCPSSRASTTSKLESCSHNELTVTLENGRMALTKQNEGKANALTFGDAMWKHCVHIAEVTFLFLIIPTTKEGGKKTREAIISADYRYTTLQRASSSMAGKIGFEDLLPVMANKLGGEGLIKELCNGFELLMDKEKGVITLDSLRRNSALLGLQDLKEDELVSMMKEGDLDGDGALSQMEFCVLMFRLSPDLMDQSWVLLQDELDHLASR 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0466 1267 CDD EGF 297 324 - -
Lele32g0466 1267 ProSiteProfiles Protein kinase domain profile. 731 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0466 1267 CDD PAN_AP_plant 347 435 - -
Lele32g0466 1267 SMART efh_1 1217 1245 IPR002048 GO:0005509
Lele32g0466 1267 Pfam S-locus glycoprotein domain 224 326 IPR000858 GO:0048544
Lele32g0466 1267 SMART ntp_6 351 434 IPR003609 -
Lele32g0466 1267 Pfam Protein tyrosine and serine/threonine kinase 734 1037 IPR001245 GO:0004672|GO:0006468
Lele32g0466 1267 CDD STKc_IRAK 737 1040 - -
Lele32g0466 1267 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 845 1048 - -
Lele32g0466 1267 SMART serkin_6 731 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0466 1267 Gene3D Transferase(Phosphotransferase) domain 1 846 1047 - -
Lele32g0466 1267 SMART blect_4 43 168 IPR001480 -
Lele32g0466 1267 ProSitePatterns EF-hand calcium-binding domain. 1226 1238 IPR018247 -
Lele32g0466 1267 CDD B_lectin 49 168 IPR001480 -
Lele32g0466 1267 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 696 806 - -
Lele32g0466 1267 Gene3D - 30 167 IPR036426 -
Lele32g0466 1267 Pfam EF-hand domain pair 1192 1244 IPR002048 GO:0005509
Lele32g0466 1267 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Lele32g0466 1267 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 193 IPR036426 -
Lele32g0466 1267 SUPERFAMILY EF-hand 1152 1249 IPR011992 -
Lele32g0466 1267 Pfam Domain of unknown function (DUF3403) 1042 1087 IPR021820 GO:0004674
Lele32g0466 1267 ProSiteProfiles Bulb-type lectin domain profile. 37 161 IPR001480 -
Lele32g0466 1267 Pfam PAN-like domain 350 419 IPR003609 -
Lele32g0466 1267 Gene3D - 1159 1265 - -
Lele32g0466 1267 Pfam D-mannose binding lectin 87 182 IPR001480 -
Lele32g0466 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Lele32g0466 1267 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 142 1069 - -
Lele32g0466 1267 Gene3D Phosphorylase Kinase; domain 1 697 806 - -
Lele32g0466 1267 SUPERFAMILY Protein kinase-like (PK-like) 713 1063 IPR011009 -
Lele32g0466 1267 ProSiteProfiles EF-hand calcium-binding domain profile. 1213 1248 IPR002048 GO:0005509
Lele32g0466 1267 ProSiteProfiles PAN/Apple domain profile. 347 428 IPR003609 -
Lele32g0466 1267 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0466 Lele-ChrLele32 2918793 2927104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0466 710 1055 Receptor kinase-like Gene Family AT4G23230 53.736 2.66e-117 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele32g0466 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0493 29 2971317 2971631 Lele32g0466 32 2918793 2927104 hybridization
Lele30g0916 30 12954338 12962734 Lele32g0466 32 2918793 2927104 hybridization