Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0450 ATGGAACCTCTATGTGATCTTTGTGGGGTTGTAAGAGCAGTGGTGTACTGTAAGTCAGATTCTGCTCGTCTCTGCTTGAATTGCGATGGCCGTGTACACTCTGCGAATGCTTTGTCACGCCGTCATCCTCGTTCACTCTTATGTGATAAGTGCAATTCCCAGCCAGCAATTGTCCGCTGCATGTATGATGAAATGTCTGTGTGTCAATCTTGTGACTGGAACCAAAATGGCTGTTCACAACTGGACCATAAGTGTCAGGCATTGAGTTCTTACATTGGTTGTCCCTCTTCGGCCGACTTCTCAAAAATATGGTCCTTTGTTCTCGATGCTCCTCCTTCAGGTGGTCTTGGTGTTACTGGTTCTCGATCATTTACCACATTGCCTGGAAATGACAGCTGCTCCAGCATGTGTTTGAAGCAACCAGATAATGATGCCTCTTCTGATTTGGTGACTGGTAAGGAGAATGAAATAAAACCATGTGTCAAATATGATCCTTGGATGGGACAATCTTCTAAGATCATACTGCCAAACACAAATTTCTTGTCATGGTACAGAGATCAACCATTTTCATTTCCTCTTGACTCAGATCTGGCAAAGGGATATCCTAATTTAAAGGATCTTGGGACTGCTAGTGGTGATGATCTCTGTGGAGGTGTCAACATAGAAGAACTTTCATTAAGCTTTGAAAGTGACGATGAAATACTGGATTGCACTCAAGAAGCCACCAGATACCATCTTGAGAATGGAGAAATTGACTATTTATTACTGGAAAAGAACATATCAGTGCCAGAACCTAATGATCTTATTGAGAATGCCTTAGAGGCATCTTCATCAGTTCAACAGGAGTATGTAGCCTTCCAATCATCCAGGCCTAGCGGGTCAGTTAACGTGGGTCACAGCATTAACAGCAACGCAAATCCTATACCCATGAAGCTGAGCTGCAACCAAAACGTCAATCTAGGATATCCTCATGGTCCAGTTCCTCAAAGCATGTCAGTTTCATTATCAAGCATTAGTGGGGAAAATAGTACCCCTGATTATCAAGATTGTGGACTATCCCCAGCATTCCTGACCGGTGTTAGCCAGTGGGAACCAAATTTTGGGCCACAAGAAAGGGACAGAGCTAAAAGGAGATACAACGAGAAAAAGAAAACCAGGACGTTTGGTAAACAAATAAGATATGCATCTCGCAAGGCAAGAGCTGATACTAGAAAACGGGTGAAAGGTAGATTTGTGAAAGCTGGCGAAGCATATGATTATGATCCTCAAGTCACTGGGAACTTCTAA 1287 0.4305 MEPLCDLCGVVRAVVYCKSDSARLCLNCDGRVHSANALSRRHPRSLLCDKCNSQPAIVRCMYDEMSVCQSCDWNQNGCSQLDHKCQALSSYIGCPSSADFSKIWSFVLDAPPSGGLGVTGSRSFTTLPGNDSCSSMCLKQPDNDASSDLVTGKENEIKPCVKYDPWMGQSSKIILPNTNFLSWYRDQPFSFPLDSDLAKGYPNLKDLGTASGDDLCGGVNIEELSLSFESDDEILDCTQEATRYHLENGEIDYLLLEKNISVPEPNDLIENALEASSSVQQEYVAFQSSRPSGSVNVGHSINSNANPIPMKLSCNQNVNLGYPHGPVPQSMSVSLSSISGENSTPDYQDCGLSPAFLTGVSQWEPNFGPQERDRAKRRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPQVTGNF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0450 428 Pfam CCT motif 372 414 IPR010402 GO:0005515
Lele32g0450 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 417 - -
Lele32g0450 428 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lele32g0450 428 MobiDBLite consensus disorder prediction 365 386 - -
Lele32g0450 428 CDD Bbox1_BBX-like 4 47 - -
Lele32g0450 428 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele32g0450 428 ProSiteProfiles CCT domain profile. 372 414 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0450 Lele-ChrLele32 2836656 2838424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0450 1 422 C2C2-CO-like Transcription Factor Family AT3G21880 39.394 7.32e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele32g0450 CCT 1.9e-15 CL0281