Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0444 ATGTCTGAATTCGATGCACAGACTCCAACTGCTTATGATCCCTTTGCCGATGCAAATGCTGAAGACTCTGGTGCTGGGACAAAAGAGTATGTTCATGTGCGTGTGCAACAACGCAATGGAAGGAAAAGCCTGACAACTGTTCAAGGGTTGAAGAAAGAGTACAGCTATAGCAAGATACTGAAGGACCTGAAGAAAGAGTTCTGCTGTAATGGTACTGTTGTCCAAGATCCTGAATTAGGCCAGGTCATACAACTTCAGGGAGATCAAAGGAAGAACGTTTCCACATTCCTTGTGCAGGCTGGCATAGTAAAGAAGGAGCAGATCAAGATTCATGGTTTCTAA 342 0.4415 MSEFDAQTPTAYDPFADANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEQIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0444 113 Gene3D - 1 113 - -
Lele32g0444 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Lele32g0444 113 MobiDBLite consensus disorder prediction 1 23 - -
Lele32g0444 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Lele32g0444 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Lele32g0444 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Lele32g0444 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Lele32g0444 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Lele32g0444 113 SUPERFAMILY eIF1-like 5 113 IPR036877 GO:0003743|GO:0006413
Lele32g0444 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0444 Lele-ChrLele32 2800969 2802089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0444 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 91.150 2.02e-76 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0464 29 2838442 2839818 Lele32g0444 32 2800969 2802089 hybridization
Lele30g0939 30 13071579 13073297 Lele32g0444 32 2800969 2802089 hybridization