Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0443 ATGGTTGTTACCAAGACGATCTTTGCAATAAATTTGTCATTATGTCTCCGCGTGTGCCGTGGTTTATTTTCGTTTCTGTTTCTTTTGCTCCGGAAATCCTCGACAGAAGAGGAATCTGGTTCGTCACTCTTGAAACAATGGAAGAGGAATGTGATGATCGGTAGAGGAAGATGGGAAATCCCTGGGAGAAAGGCCTTTACTTTTGGCCAGAGCAGAGCAATGTGTGATTTGGCTGATATGGATCGCGCTTCTGATGATGTTTCCGCAGATTCTACAGAGCAAACCGGTCAAGCTTCCAAGGGTGAGTTTTCTGAAGATGAGGAAACCCTTATAACCAGGATGTACAATCTGGTCGGGGAGAGGTGGTCTTTGATTGCTGGAAGAATCCCTGGAAGAACAGCAGAAGAAATAGAGAAGTACTGGACTTCAAGATGCTCAACCAGTGAATAA 450 0.4467 MVVTKTIFAINLSLCLRVCRGLFSFLFLLLRKSSTEEESGSSLLKQWKRNVMIGRGRWEIPGRKAFTFGQSRAMCDLADMDRASDDVSADSTEQTGQASKGEFSEDEETLITRMYNLVGERWSLIAGRIPGRTAEEIEKYWTSRCSTSE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0443 149 CDD SANT 102 141 IPR001005 -
Lele32g0443 149 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 98 145 - -
Lele32g0443 149 MobiDBLite consensus disorder prediction 84 104 - -
Lele32g0443 149 Pfam Myb-like DNA-binding domain 100 142 IPR001005 -
Lele32g0443 149 FunFam MYB-like transcription factor 102 144 - -
Lele32g0443 149 Gene3D - 102 149 - -
Lele32g0443 149 SMART sant 99 147 IPR001005 -
Lele32g0443 149 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 149 IPR017930 -
Lele32g0443 149 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Lele32g0443 149 SUPERFAMILY Homeodomain-like 99 144 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0443 Lele-ChrLele32 2798656 2800814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0443 100 143 MYB Transcription Factor Family AT5G35550 61.364 1.81e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele32g0443 Myb_DNA-binding 1.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0463 29 2834820 2835420 Lele32g0443 32 2798656 2800814 hybridization
Lele30g0940 30 13075023 13075635 Lele32g0443 32 2798656 2800814 hybridization