Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0435 ATGGAAGTTGTTTTACATGATACAAACTGCAGCGGGTTTCTTGGCACAGTGGAAGCTCTGCAGTTGATGGAGAATGATGTGGTTGCTGCCATTGGTCCGCAGTCATCTGGAATAGCTCATGTCATCTCTCATGTTGTTAATGAACTCCATGTGCCTCTTCTCTCATTTGGGGCCACAGACCCTACTCTTGCTTCTCTGCAGTACCCTTATTTTGTCCGCACTACCCAGAATGACTATTTTCAGATGAACGCGATCGCGGACTTGGTTGACCACTTTGGTTGGAAGGAGGTGATTGCCGTCTTTGTAGATGACGATAATGGAAGAGGTGGAGTTTCAGCTCTAGGTGATGCGCTTGCGAAGAAGCGTGCCAAGATCTCTTATAAGGCTGCCTTTACTGCTGGAGCCTCTGCAAGTAATATCAGTGACTTGTTAAATGAGGTCAACTTAATGGAATCAAGGGTCTATATTCTCCATGTTAACCCTGATACTGGTTTGTCCATTTTTTCTATCGCGAACAAAATTGGTATGATGGGCAGTGGTTATGTTTGGATTGCAACAGATTGGCTTCCTTCAGTTCTAGATGCATCAGAACCAGCTGATCCTGAAACAATGAATGCCTTACAAGGGGTTATCGCCTTTCGCCATCATACTCCTGAAAATGATCTCAAGAAAAGGTTTATCTCTAAGCTGAAAAACAGTAAAGATAGGGACACTGAGACCTTTAATTCCTATGCATTATATGCATATGATTCGGTTTGGTTAGCAGCACGTGCTCTTGATGCGTTTCTTAATGAAGGTGGAAATGTATCTTTCAGTAGTGACCCTAGATTGCATGACACAAATGGAAGCACGTTGCATTTAGCATCACTTCGTACTTTTGATGGTGGCCCACAGTTTCTCCAGAAAGTTCTGGCAATGAACTTCACTGGTCTGAGTGGTCAAATTCAGTTTGATGGGGACAAGAATTTAATCCATCCAGCGTATGATATTCTAAACATTGGTGGATCTAGCCGTAGAATCGGTTATTGGTCTAATTACTCTGGCCTGTCAGTTGTAACACCTGAAATTTTATATACAAAACCACCTAACATTTCAACTAGCAATCAGCATCTTTACGGTGTGATATGGCCGGGAGAGACTACGGTAATACCTCGGGGATGGGTGTTTCCCAACAATGGAAAGCCACTGCGAATAGCAGTACCAAACCGAGTAAGCTATCAAGAGTTTGTTTCCAGAAACAAGGACCCCCCAGGAGTAAGAGGTTATTGCATTGATGTCTTTGAAGCAGCCATAAACCTGCTGCCATATCCTGTCCCACGACAATATATATTGTATGGAGATGGTCTTAGAAATCCCAACTACAATGCCCTCACGGATGCAGTTGCACAAAATAATTTCGATGCAGCTGTTGGAGATGTTACAATTGTCACAAACAGAACAAGGATTGTGGATTTTACTCAACCTTTCATGGAATCAGGGTTGGTTGTAGTCGTTGCTGTTAAGGAGGAGAAGTCAAGCCCTTGGTCATTTCTCAAGCCATTCAATGCACAAATGTGGTGCGTCACTGGTGCCTTCTTTCTCTTCGTGGGAGCTGTGGTATGGATTCTTGAGCACCGGCTCAATCCCGAGTTCCGTGGTTCTCCAAGGAAACAACTTATGACCATTTTTTGGTCCTTGGTAAAAACTCTGACATCTTATTGTATTTGGCCCAATGCAGGACAAAACACTGTGAGCACTTTGGGGAGGTTGGTGTTACTGATATGGCTTTTTGTGGTGTTAATCATCAATTCAAGCTACACTGCTAGCTTGACATCGATCCTCACGGTACAGCAACTATCAACTCAGATTGAAGGAATTGGCAGCTTGATTTCAAGTAATCAACCTATTGGAATTCAAGATGGGTCATTTGCGCGAAAGTATCTGATAAATGAGCTGAATATAGCCGAATCTAGGATGGTGACTTTGAAAAACCAGCAGGATTACATCGATGCCCTTCAACGTGGACCAAACGGTGGAGGGGTGGTGGCAATCGTCGAGGAGCTTCCCTATATTGAGATATTAATGGCTAACACTAATTGTAAATTCAGAACTGTAGGCCAGGAGTTCACTAAAAGTGGATGGGGATTTGCATTCCAAAGGGACTCTCCCCTTGCTGTGGACTTGTCAACTGCCATTCTTCAACTATCGGAGAACGGCGACTTGCAAAAGATCCACGACAAATGGCTCTCAAAATTCACCTGTTCTGCAAAAGTCAACGACATTGACTCAAACCAGCTCGCTCTCAGCAGCTTCTGGGGCCTGTTTTTGATATGTGGGATTGCATGTTTTCTTGCTCTAGTTATATTCTCTATCAGGGTGTTCTGTCAATATATGAAATTTATCCCAAACAGTGATGAGGAAGCTGAAGAGCAGCATGTTGAACCTGCCAGTGCTAGAAGGACAATAAGATCCTCCACTAGCTTCAAGAACTGGATTGATTTTGTAGATAAAAAGGAAGCCGAAATAAAGGAGATATTGAGGGACAAGAATAAGAAACGACGGCGCAGCCAGACCTTAGACGGGATCTCCAATCATTCAAACAGCTAA 2586 0.4343 MEVVLHDTNCSGFLGTVEALQLMENDVVAAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLASLQYPYFVRTTQNDYFQMNAIADLVDHFGWKEVIAVFVDDDNGRGGVSALGDALAKKRAKISYKAAFTAGASASNISDLLNEVNLMESRVYILHVNPDTGLSIFSIANKIGMMGSGYVWIATDWLPSVLDASEPADPETMNALQGVIAFRHHTPENDLKKRFISKLKNSKDRDTETFNSYALYAYDSVWLAARALDAFLNEGGNVSFSSDPRLHDTNGSTLHLASLRTFDGGPQFLQKVLAMNFTGLSGQIQFDGDKNLIHPAYDILNIGGSSRRIGYWSNYSGLSVVTPEILYTKPPNISTSNQHLYGVIWPGETTVIPRGWVFPNNGKPLRIAVPNRVSYQEFVSRNKDPPGVRGYCIDVFEAAINLLPYPVPRQYILYGDGLRNPNYNALTDAVAQNNFDAAVGDVTIVTNRTRIVDFTQPFMESGLVVVVAVKEEKSSPWSFLKPFNAQMWCVTGAFFLFVGAVVWILEHRLNPEFRGSPRKQLMTIFWSLVKTLTSYCIWPNAGQNTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSTQIEGIGSLISSNQPIGIQDGSFARKYLINELNIAESRMVTLKNQQDYIDALQRGPNGGGVVAIVEELPYIEILMANTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSKFTCSAKVNDIDSNQLALSSFWGLFLICGIACFLALVIFSIRVFCQYMKFIPNSDEEAEEQHVEPASARRTIRSSTSFKNWIDFVDKKEAEIKEILRDKNKKRRRSQTLDGISNHSNS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0435 861 FunFam Glutamate receptor 638 746 - -
Lele32g0435 861 FunFam Glutamate receptor 77 244 - -
Lele32g0435 861 Pfam Ligand-gated ion channel 744 775 IPR001320 GO:0015276|GO:0016020
Lele32g0435 861 PRINTS Metabotropic glutamate GPCR signature 30 56 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele32g0435 861 PRINTS Metabotropic glutamate GPCR signature 62 81 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele32g0435 861 PRINTS Metabotropic glutamate GPCR signature 81 97 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele32g0435 861 PRINTS Metabotropic glutamate GPCR signature 97 114 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele32g0435 861 Gene3D - 391 506 - -
Lele32g0435 861 FunFam Glutamate receptor 391 507 - -
Lele32g0435 861 Pfam Bacterial extracellular solute-binding proteins, family 3 453 743 IPR001638 -
Lele32g0435 861 CDD GluR_Plant 394 742 - -
Lele32g0435 861 Gene3D - 631 745 - -
Lele32g0435 861 SUPERFAMILY Periplasmic binding protein-like I 2 388 IPR028082 -
Lele32g0435 861 PIRSF IGluLR_plant 1 861 IPR017103 -
Lele32g0435 861 SUPERFAMILY Periplasmic binding protein-like II 372 742 - -
Lele32g0435 861 SMART GluR_14 397 744 IPR001320 GO:0015276|GO:0016020
Lele32g0435 861 Coils Coil 828 848 - -
Lele32g0435 861 CDD PBP1_GABAb_receptor_plant 3 352 IPR044440 -
Lele32g0435 861 FunFam Glutamate receptor 507 642 - -
Lele32g0435 861 Gene3D - 77 349 - -
Lele32g0435 861 Pfam Receptor family ligand binding region 2 334 IPR001828 -
Lele32g0435 861 Gene3D - 507 630 - -
Lele32g0435 861 Gene3D - 4 325 - -
Lele32g0435 861 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0435 Lele-ChrLele32 2747458 2751288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0435 1 709 Ion Channels AT1G05200 67.746 0.0 1042