LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele32g0426	ATGCCGAGGAATATGATCTACAGTGAAGACTACTTTAGAGACGAGGTTGAGGACGAGGTGGTGGACACGGCGAACGCAGAGGCGAAGCAGAACATGAAGAAGGGGCCATGGACGGCGGCGGAGGACGCGATTTTAATAGAGTACGTGAACAAGTACGGCGAGGGGAATTGGAATTCCGTGCAGAAGAACTGTGGGTTGACGAGGTGTGGCAAAAGTTGCAGGCTCCGATGGGCCAACCATCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCTCAGGAAGAAGAACAGCTCATCGTCGAGCTTCACGCCCACCTCGGAAACAAATGGGCTCGCATGGCCTCCCTGTTACCAGGGAGAACTGATAATGAAATAAAGAATTTCTGGAACACGAGAATGAAAAGATACCAGAGAGCTGGTTTGCCTTTGTATCCTCCAGAACTTCAAGAAGAAGCTTCTCCACATCATCATCTTCACCAAAACCAGCAATACCAAGCACCACCACCACCACCACCACCTCACCATTCTCCTTCTTTTTCATTTTCTTCTCTCCTATCTTCTCCTTACAACAAACGCCATAAGCTCAATGGCCAGCAAAACAATTCTGATTCTGATACAACTTATGACATAAGCTATCATCAACACCCTCAAAACATGGGCCTGCCATTACTATCCTCTCTTTCTCCCAATGGGTTTAATTATTCCGGTGGTGCGATGACGGAGATCTCTTCGACCCAATCGGAAACACCTCCTTCTTCATCCTACAGTACTGGTGGGTTTCATGGCTTGATGGGAGGTTCCACCATTAATGGTCCTGGTCTTGACTACCATGAGGTTGCAACATTGTCAACATCATCAACTGAAGTAAACAGTGGGCTCTTGGATGCTGTATTAATGGAGTCTCAAGCCCTTTCTCGCAGTGACAAACGCAAGTGGAAAAGTAACGATTCTTCTGCAGGAAGGAAGTTATGCTTGAAGAGGAAGCGCATTGCAGATGAAGACAAAGGCACTGAGCAATTGGAGCAATTCCAGAGGGACGATTTAAGCTCTTCTCAATTATCAACAGAGAAGAAAGCATCATCATCATCTGTTAGGGATAATGATCCATTGGAGATGAGTTCGATGGACGATGATTTGTTTAGCTTGCTGAACAATTTTCCATCAGAAATGCCAGTGCCTGAGTGGTATCGAAGAGGAGAAAGAAAAGCATTGGAAGCCGAAAATCAACAAGAAGTTTCACTGGGCCAACCCGATCAGCAACTTGCTTGGACCCTCGGAACCTGCTGGTCCAACGACTTGCCTAGTAAATGCTAA	1311	0.4653	MPRNMIYSEDYFRDEVEDEVVDTANAEAKQNMKKGPWTAAEDAILIEYVNKYGEGNWNSVQKNCGLTRCGKSCRLRWANHLRPNLKKGAFSQEEEQLIVELHAHLGNKWARMASLLPGRTDNEIKNFWNTRMKRYQRAGLPLYPPELQEEASPHHHLHQNQQYQAPPPPPPPHHSPSFSFSSLLSSPYNKRHKLNGQQNNSDSDTTYDISYHQHPQNMGLPLLSSLSPNGFNYSGGAMTEISSTQSETPPSSSYSTGGFHGLMGGSTINGPGLDYHEVATLSTSSTEVNSGLLDAVLMESQALSRSDKRKWKSNDSSAGRKLCLKRKRIADEDKGTEQLEQFQRDDLSSSQLSTEKKASSSSVRDNDPLEMSSMDDDLFSLLNNFPSEMPVPEWYRRGERKALEAENQQEVSLGQPDQQLAWTLGTCWSNDLPSKC	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele32g0426	436	Gene3D	-	26	86	-	-
	Lele32g0426	436	SUPERFAMILY	Homeodomain-like	31	128	IPR009057	-
	Lele32g0426	436	CDD	SANT	89	130	IPR001005	-
	Lele32g0426	436	ProSiteProfiles	Myb-like domain profile.	29	81	IPR001005	-
	Lele32g0426	436	SMART	sant	86	134	IPR001005	-
	Lele32g0426	436	SMART	sant	33	83	IPR001005	-
	Lele32g0426	436	MobiDBLite	consensus disorder prediction	342	368	-	-
	Lele32g0426	436	MobiDBLite	consensus disorder prediction	177	213	-	-
	Lele32g0426	436	Gene3D	-	89	160	-	-
	Lele32g0426	436	FunFam	MYB-related transcription factor	33	86	-	-
	Lele32g0426	436	ProSiteProfiles	Myb-like domain profile.	82	132	IPR001005	-
	Lele32g0426	436	PANTHER	TRANSCRIPTION FACTOR MYB33-RELATED	24	408	-	-
	Lele32g0426	436	FunFam	Transcription factor GAMYB	89	135	-	-
	Lele32g0426	436	MobiDBLite	consensus disorder prediction	340	371	-	-
	Lele32g0426	436	Pfam	Myb-like DNA-binding domain	37	97	-	-
	Lele32g0426	436	CDD	SANT	36	81	IPR001005	-
	Lele32g0426	436	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	29	81	IPR017930	-
	Lele32g0426	436	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	82	136	IPR017930	-
	Lele32g0426	436	MobiDBLite	consensus disorder prediction	150	213	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele32g0426	Lele-ChrLele32	2696059	2697970	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele32g0426	32	151	MYB Transcription Factor Family	AT5G06100	81.667	2.40e-67	221

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele32g0426		Myb_DNA-bind_6	2.5e-15	CL0123