Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0424 ATGGGGTTGGTAAAGTCAGCCATTGGAGACGCCATTCTAACCTCAATCTGGGTTTTCAGCATCTCAACTCTCAGAATCCTCTCTTCCGAAGTCGCCTCCTTCCTTAGCCTCCACCCTTCTTCACTCGCTGGCCTCTTCATCACCACTGTCATCAACACCATTCTCGTCTTCACTATCAGTCTCATCGGCAGATTCCTCGGCGGTGCTAGTTTCAATCCCTCCACCACCGTCTCCTTTTATGCGGCCGGGCTCCGACCCGACTCCTCTCTGACCTCCATGGCTGTCCGGTTTCCTGCTCAGGCAGCAGGTGGGGTCGCCGGAGCTCATGCTATTCTGCACCTAATTCCCACCCAGTTCAAATCCTTGCTTAAAGTTCCTAACTTGAAGGTGGATTTGCATACTGGGGCTATTGCAGAGGGCGTGCTGACTTTTGGCCTCAACTTGGCTATTCTTCTTGTTATGCTCAAAGGTCCTAAGAACCCTTTCTTGAAGTTGTATTTGCTTTCTGTGGCCACGGTGTCTCTGGTTATTCCTGGTTCTGCGTACACAGGACCTTCCATGAACCCAGCTAATGCATTCGGATGGGCTTACATCAACAATAGCCACAACACTTGGGAGCAGTTTTATGTTTATTGGATATGTCCTTTCATTGGGGCTACTCTTGCTGCTTCCGTCTATCGATTTCTCTTTATGTCACCAGTCAAGCAGAAGAAAGCTTGA 720 0.4958 MGLVKSAIGDAILTSIWVFSISTLRILSSEVASFLSLHPSSLAGLFITTVINTILVFTISLIGRFLGGASFNPSTTVSFYAAGLRPDSSLTSMAVRFPAQAAGGVAGAHAILHLIPTQFKSLLKVPNLKVDLHTGAIAEGVLTFGLNLAILLVMLKGPKNPFLKLYLLSVATVSLVIPGSAYTGPSMNPANAFGWAYINNSHNTWEQFYVYWICPFIGATLAASVYRFLFMSPVKQKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0424 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Lele32g0424 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
Lele32g0424 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele32g0424 239 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele32g0424 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele32g0424 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele32g0424 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele32g0424 239 Pfam Major intrinsic protein 5 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele32g0424 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0424 Lele-ChrLele32 2672400 2673119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0424 1 230 Major Intrinsic Protein MIP AT3G04090 47.186 1.19e-61 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0443 29 2705173 2705892 Lele32g0424 32 2672400 2673119 hybridization
Lele30g0962 30 13243575 13244294 Lele32g0424 32 2672400 2673119 hybridization