Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0417 ATGGCCAGAGGGAGTGGACTCTCCATTGATTCAGATCCAGCTTCTAGCAGCTTCTTCCTCTCCAATAATCCCATTGTTCTTAAAGACGCCATTCAACCTCACATGGACTCTTCAATCCCTTTCTTTGAGATGGACTTCTTCTCCAACAACAACAATCTCAGGCCTGCCCCTTCCAACGCCGATTCCTCCACCCCTTCTCATCATCTTCATTTCAAAGTAAACAGAGAAACTAGCCAAGATTCGGGTGAGAAATCTAGATGTGACCGTGAACTGAATGACCTTTTGTGTTGGGTGATTCTGGTTCTGGCATTGAATGCATTTATGTGTATATTTCAGACTGAGATTGCTGTTGTTCGAGCTGAGTTAGAGGAGATGATGATGATGGGAGAGAATCATAATAAGCTGAAAGACATGCTAAACGAGGTTAACACCGATTACAATGCTCTCAAGATGCAGATAAACTCTATCGAGTCTCGCAAGGGTGGTGAGTACGCTGAGAAACATGAAAACAACGTGTTTAATGATGCAAGCCCAGAAGAAAAGAAGAAAACTGAGGGTAATAGAGGAAACTTAGTGCCAAGGAAATTCATAGATATCGGGTTAGCTTCAATCAATGAAGGTGATCAGGCTAATAACGTTGAGCCTTCGCTTTCTTCCTGTGCGAGGAGAAGCAGTGATGGATCAAGATCACCCTTAGAAGTGGAATGTAGCGCCAAAATTGGTTCGGAGAAGAAGGAAATTAACAAAGAAACTAAAATTGAACAAGAAGCAGACAGGATTAATCAAACGTATAGTCCTCCCAAAAACGTTGATGATCAGGTGGATGCCATTATGAAGAAGGCAAGAGTTGCAATTAAAGCTTTTTCAGAAGCACCAATGATTACCGATGGATGTCAATGGAGAAAATATGGGCAGAAGATGGCCAAAGGGAATCCATGCCCCAGAGCTTATTATCGTTGCACCATGGGTACAAGTTGTCCAGTTAAGAAACAGGTGCAAAGGTGTGCAGAGGATCGATCAATCTTGGTAACGACATATGAGGGGAATCATAACCACGCATTACCTCCGACAGCAATGGCGATGGCACAAATGACAGCGGCTGCAGTAAGGACGTCGCTTTCAGGATCAATGTCAAGCAACGATGGCCTAATGAATGGAAGCTTCTTGACAAGGACGACGTTGCTTCCTTGTTCTTCAAGTAACATTGCAACTCTCTCGGCCTCAGCCCCATTTCCAACTATTACGTTGGACTTGACTAATCCTCCAACAGCACAAGCACAACCTTCTACCCAATTTCAAGTGCCTTTGTCAAATAATAATGCCTCTCACGTTTTAACTCAAGTTTTGGCTCAAGCGCTTTATAGCAACAATCAATCAAGTTTTTCAGGGCTTCAGATGAATAATAATGACCCCTTGCCATTGAGTGCTATTATAGCAGCTAACCCTAACTTCACAAGAGCTTTAACAGCGGCCATTACTTCTTCTATTTCTGCTCTACCAAAGAATGTTAACGGTGACAATATTCGCAGTCTTACAGCAAGTGGCAATAACAATGATTCAAATTTTGCAGGGAACTAG 1578 0.4278 MARGSGLSIDSDPASSSFFLSNNPIVLKDAIQPHMDSSIPFFEMDFFSNNNNLRPAPSNADSSTPSHHLHFKVNRETSQDSGEKSRCDRELNDLLCWVILVLALNAFMCIFQTEIAVVRAELEEMMMMGENHNKLKDMLNEVNTDYNALKMQINSIESRKGGEYAEKHENNVFNDASPEEKKKTEGNRGNLVPRKFIDIGLASINEGDQANNVEPSLSSCARRSSDGSRSPLEVECSAKIGSEKKEINKETKIEQEADRINQTYSPPKNVDDQVDAIMKKARVAIKAFSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMGTSCPVKKQVQRCAEDRSILVTTYEGNHNHALPPTAMAMAQMTAAAVRTSLSGSMSSNDGLMNGSFLTRTTLLPCSSSNIATLSASAPFPTITLDLTNPPTAQAQPSTQFQVPLSNNNASHVLTQVLAQALYSNNQSSFSGLQMNNNDPLPLSAIIAANPNFTRALTAAITSSISALPKNVNGDNIRSLTASGNNNDSNFAGN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0417 525 Coils Coil 132 159 - -
Lele32g0417 525 ProSiteProfiles WRKY domain profile. 289 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele32g0417 525 Pfam WRKY DNA -binding domain 296 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele32g0417 525 Gene3D WRKY domain 279 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele32g0417 525 SMART WRKY_cls 294 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele32g0417 525 SUPERFAMILY WRKY DNA-binding domain 288 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele32g0417 525 FunFam probable WRKY transcription factor 31 279 356 - -
Lele32g0417 525 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 115 505 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0417 Lele-ChrLele32 2629869 2632289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0417 112 498 WRKY Transcription Factor Family AT1G62300 43.262 7.83e-90 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele32g0417 WRKY 3.2e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1015 11 17259513 17263001 Lele32g0417 32 2629869 2632289 CCT
Lele12g0306 12 2854208 2858054 Lele32g0417 32 2629869 2632289 CCT
Lele29g0436 29 2659263 2661703 Lele32g0417 32 2629869 2632289 hybridization
Lele30g0970 30 13293623 13296095 Lele32g0417 32 2629869 2632289 hybridization