Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0411 ATGGCTATGAATCAATCACGGTTATCTTGTAGTCCGGTTCTGTTGAAGGTGGGTTTGGGGGTGATGGCTCTGTGCATCGCCAGCTACATTCTGTGTCCTCCTCTGTACTGGCATTTCATGGAAGGTGTTGCTGCACTGAAGCACTCCTCTTCTACTTGTGCGCCCTGCGTCTGCGATTGCTCTTCTGAACCGGTCCTCTCCATCCCCCAAGGGCTTGGCAATGCTTCATTTGGAGATTGTGCAAAGCATGATCCAGAGGTGAATGGAGACACTGAAAAGAACTTTGCGGAGTTGTTGTCAGAAGAGCTAAAATTACGAGAAACTGAAGCTCTGGAAACTCACCGACGTGCTGACATGGCTCTGCTTGAGGCTAAGAAAATTACGTCTCAGTATCAAAAGGAAGCAGACAAGTGCAATTCAGGGATGGAGACATGCGAGGATGCCAGGGAGAAAGCAGAGGCAGCATTAGCGGCACAAAAGAAGTTGACAGTGTTGTGGGAACTGAGGGCTCGTCAGAAAGGATGGAAAGAAGGGGTTTCCAAGTCTAATGCCCAGTCTCAGGGAAAAGTGCAGACTTCTTAG 582 0.4914 MAMNQSRLSCSPVLLKVGLGVMALCIASYILCPPLYWHFMEGVAALKHSSSTCAPCVCDCSSEPVLSIPQGLGNASFGDCAKHDPEVNGDTEKNFAELLSEELKLRETEALETHRRADMALLEAKKITSQYQKEADKCNSGMETCEDAREKAEAALAAQKKLTVLWELRARQKGWKEGVSKSNAQSQGKVQTS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0411 193 Coils Coil 142 162 - -
Lele32g0411 193 Pfam Protein of unknown function (DUF1068) 14 178 IPR010471 -
Lele32g0411 193 PANTHER EXPRESSED PROTEIN 14 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0411 Lele-ChrLele32 2600826 2602888 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0300 12 2750258 2758835 Lele32g0411 32 2600826 2602888 CCT
Lele29g0432 29 2637946 2639897 Lele32g0411 32 2600826 2602888 hybridization
Lele30g0975 30 13324735 13326800 Lele32g0411 32 2600826 2602888 hybridization