Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0400 ATGGAAATGATGGCTGCAGCCGAACGTGTTTGTTATGTTCAATGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCAGCTTACTGACCATAGTGACGGTTAGATGTGGGCATTGTGCTAATTTGCTATCAGTCAACATGGGTTCTTCACTTCAAGCGTTTCCTCCTCATCAGACTCACCCTCAGTCACAGAAACAGCATCTGACTTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCCTCAAAATGCAGCAAGTTAGCTCCATTTGAGCCTGTAGAGCATGAGCAACCTAGGATTCCTCCCATTCGCCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGGGAGGCTTTTAGCACAGCTGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGACTGAAGCTGGATGGAAACAAGCAAGGAGATAAGTTGGAGCAGGGGGAGGGAACTCAAAAGTCTAATGGATTCTACTGA 555 0.4541 MEMMAAAERVCYVQCNFCNTILAVSVPCSSLLTIVTVRCGHCANLLSVNMGSSLQAFPPHQTHPQSQKQHLTFEEPSNKDLGSSSKCSKLAPFEPVEHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQGDKLEQGEGTQKSNGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0400 184 MobiDBLite consensus disorder prediction 92 109 - -
Lele32g0400 184 Gene3D High mobility group box domain 98 155 IPR036910 -
Lele32g0400 184 MobiDBLite consensus disorder prediction 56 85 - -
Lele32g0400 184 FunFam Axial regulator YABBY 105 175 - -
Lele32g0400 184 Pfam YABBY protein 6 160 IPR006780 GO:0007275
Lele32g0400 184 SUPERFAMILY HMG-box 102 153 IPR036910 -
Lele32g0400 184 PANTHER PROTEIN YABBY 6-RELATED 5 170 IPR006780 GO:0007275
Lele32g0400 184 MobiDBLite consensus disorder prediction 164 184 - -
Lele32g0400 184 MobiDBLite consensus disorder prediction 56 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0400 Lele-ChrLele32 2536692 2542568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0400 1 184 C2C2-YABBY Transcription Factor Family AT1G08465 65.591 1.10e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele32g0400 YABBY 4.3e-72 CL0114