Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0390 ATGAATGTCGATTCCTCCATGGCTCCGGAAAACGATCAGGATCCAGTTGTGCAGAACAACAACACAACTCAGTCTGCTGCGGCAATTGAAAGGGAGCAGCTTGGAGAGCAGCCGGCGTCAACTGGCGCATCTCCATCGACTACCCAGTCGCCGGGGCAGCAGCAACAGCAGCAGGTGTCTTCTCAGGTGCAGCAGTGCCCTGTTATTGGACCTAGGCTCGCGCCAACTTACTCTGTGGTTAATGCAATAATTGAAAAGAAGGAGGACGGACCAGGGCCTAGGTGTGGCCACACCTTGACTGCCGTCTCAGCTGTTGGAGAGGAAGGTACACCTGGGTACATTGGCCCAAGGCTGATTTTGTTCGGTGGTGCCACTGCACTTGAAGGGAATTCGGCAGCTTCCGGAACTCCTTCTTCGGCAGGAAGTGCCGGAATACGTTTAGCTGGTGCCACGGCTGATGTCCATTGTTATGACGTCTTAACTAATAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCAAGGGCTGCTCATGTGGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGAATTGGTCCTGCTGGCTTGTCAGCAGAAGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCTCGATGGCATAGAGTTGTTGTTCAAGGTCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGATATCTAATGGCTATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCGCCATGCATGTATGCAACTGCAAGCGCACGCTCTGATGGGCTTCTTTTACTTTGTGGGGGGAGGGATGCCAATAGTGTGCCATTGGCAAGTGCATATGGACTGGCAAAGCATAGGGATGGCCGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCTGTATTTGTTAACGCAAGGCTACATGTATCTGGAGGGGCTCTTGGGGGAGGACGGATGGTAGAAGACTCGTCAAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGACACAAAATCTGTTGTTACTAGTCCAAGGACAGGAAGATACAGTGCTGATGCAGCTGGTGGGGATGCTTCAGTGGAGTTGACCCGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTGCGTGGCGGAGTTTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACCACAGCTGCGGCTTCTCATGCTGCTGCAGCTGCTGCAACTAATTTGCAACCAGGATGTATGCCTGGACGATATGGATTTGATGATAGATCAAGGCAAACAATGCCTGAAGCGGCTGCTGATGGTGCAGTTGTTCTGGGCAATCCCGTTGCTCCCCCTATAAATGGTGACATGTATACTGATATTAGCACTGAAAATGCCATGCTACAGGGAACTAGGCGAACTAGCAAAGGCGTTGAATATCTAGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCTACGTTAGCTGCTGCTAAGGCACGGCAGGTGAATGGAGAAGTTGATTTGCCTGACAGAGATGGTGGGGCTGAGGCTACTCCAAGTGGGAAACCTATATCTTCTTTGATTAGGCCTGATTCTGCAGTATCAACTAATATTGCTCCTGGTGGAGTTAGGCTTCATCATAGAGCCGTGGTTGTTGCTGCTGAGACTGGTGGAGCATTAGGTGGGATGGTTAGACAGCTTTCCATTGATCAGTTTGAAAACGAAGGCAGGCGTGTCAGTTACGGAACTCCAGAAAATGCAACTGCAGCCAGAAAACTATTAGATCGGCAGATGTCTATTAATAGTGTCCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGAGGCTGGAAACCACCAGTTCGCCGGCAATTTTTCTTAGACTGCAATGAAATTGCAGATCTTTGTGATAATGCAGAGCGGATATTTTCTAGTGAACCAAGTGTCCTACAACTTAGGGCACCCATTAAAATATTTGGTGATTTACATGGTCAATTTGGGGATCTTATGCGGCTTTTTGATGAGTATGGGGCACCATCAACTGCTGGCGACATCGCATATATCGATTATCTATTCCTAGGAGATTACGTTGACAGAGGCCAACACAGCCTGGAAACTATAACCCTTCTGCTTGCCCTGAAGGTTGAGTATCCGACCAATGTGCATTTGATACGTGGAAACCATGAAGCAGCAGATATTAATGCCCTTTTTGGTTTCCGGATTGAGTGCATTGAAAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGTATAAACCGGTTGTTTAATTGGCTTCCTCTAGCTGCTCTGATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCGATAAATCATCTGGAACAGATTGAGAACATTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTCATGGATTTGTTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGTCTACGACCTAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGTTTTGAGCGTTTTGCCCAGGGACATCTGATAACACTTTTCTCGGCCACAAACTACTGCGGTACTGCCAATAATGCCGGGGCAATACTAGTCTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTCATTCATCCATTGCCACCTGCAATTTCTTCACCAGAAGCATCGCCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCGCCAACACCAACGAGAGGCCGACCTCCAGTGGCAAATGATCGAGGTTCTCTTGCTTGGATATAG 3021 0.4839 MNVDSSMAPENDQDPVVQNNNTTQSAAAIEREQLGEQPASTGASPSTTQSPGQQQQQQVSSQVQQCPVIGPRLAPTYSVVNAIIEKKEDGPGPRCGHTLTAVSAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAATNLQPGCMPGRYGFDDRSRQTMPEAAADGAVVLGNPVAPPINGDMYTDISTENAMLQGTRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVDLPDRDGGAEATPSGKPISSLIRPDSAVSTNIAPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDNAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPTNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPEASPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0390 1006 CDD MPP_Bsu1_C 655 957 IPR041758 -
Lele32g0390 1006 Gene3D - 50 272 IPR015915 GO:0005515
Lele32g0390 1006 Gene3D - 273 461 IPR015915 GO:0005515
Lele32g0390 1006 MobiDBLite consensus disorder prediction 1 30 - -
Lele32g0390 1006 MobiDBLite consensus disorder prediction 37 64 - -
Lele32g0390 1006 SUPERFAMILY Kelch motif 148 438 IPR015915 GO:0005515
Lele32g0390 1006 Pfam Galactose oxidase, central domain 229 282 - -
Lele32g0390 1006 MobiDBLite consensus disorder prediction 1 64 - -
Lele32g0390 1006 ProSitePatterns Serine/threonine specific protein phosphatases signature. 772 777 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 921 937 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 809 835 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 703 730 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 738 765 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 771 795 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 899 919 IPR006186 GO:0016787
Lele32g0390 1006 PRINTS Serine/threonine phosphatase family signature 839 866 IPR006186 GO:0016787
Lele32g0390 1006 MobiDBLite consensus disorder prediction 554 573 - -
Lele32g0390 1006 FunFam Serine/threonine-protein phosphatase 73 270 - -
Lele32g0390 1006 FunFam Serine/threonine-protein phosphatase 274 473 - -
Lele32g0390 1006 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1006 - -
Lele32g0390 1006 PIRSF STPPP_BSU1 37 1006 IPR012391 GO:0004721|GO:0009742
Lele32g0390 1006 SMART pp2a_7 675 959 IPR006186 GO:0016787
Lele32g0390 1006 Pfam Calcineurin-like phosphoesterase 703 910 IPR004843 GO:0016787
Lele32g0390 1006 FunFam Serine/threonine-protein phosphatase 639 979 - -
Lele32g0390 1006 Pfam Kelch motif 335 381 IPR011498 GO:0005515
Lele32g0390 1006 Gene3D - 639 980 IPR029052 -
Lele32g0390 1006 SUPERFAMILY Metallo-dependent phosphatases 660 965 IPR029052 -
Lele32g0390 1006 MobiDBLite consensus disorder prediction 982 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0390 Lele-ChrLele32 2462757 2471695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0390 667 902 Calmodulin-binding Proteins AT5G63870 29.412 5.63e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1035 11 17538916 17541568 Lele32g0390 32 2462757 2471695 CCT
Lele12g0291 12 2610717 2614329 Lele32g0390 32 2462757 2471695 CCT
Lele29g0411 29 2509101 2518317 Lele32g0390 32 2462757 2471695 hybridization
Lele30g1001 30 13450421 13459435 Lele32g0390 32 2462757 2471695 hybridization