Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0385 ATGTGCGGCCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGCCGCCACAATCCTAAGCTGTTAATATGGGAAGAATGCTATTATGAATCGTTGCCTTGTCCCTTTCCTCCAAACAATGATAGAACTGGGGCATCTAACTTGCCCTTCGGAGGTTCGGAGGGCGATAGAGTATGTTCCTTGATTAACAAAATGATGGTGAATAATTCAGTCAATATTGCTGGAGAAGGGATAATTGGACGGGCAGCGTTCACGGGAAATCATCAATGGATTCTTTTGAACAATTTTACTAGAGCTGCATATCCACCAGAGGTATACAATGAGGTGCATCATCAATTTTTGGCTGAAATACAGACCATAGTGTTTATTCCCGTGCATCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGGCTATAATGGAGGATGTTGGATTTGTGAATGATGTAAGGAGTTTAATCTTTCAATTGGGATGTGTTCCTGGTGTTCTTCTATCTGAAGATTATTCTTCAAAAGTTTCTGCTCAAGGTCTTGGTGCAACTGTTACTGTTGGGGTACCTGTGTCAGTAGATCTGCCAGTTACCTCAGATTGCAGCCCCTCTGTGGCTAGTGGCTCCAACCAACAAAGCAATTTATCTCACACTTCAAACTCCGTTGTTCACCAATCTCTACCACACAGGGAAGAGGTAAATAATGGCCAGGTTTCTGTATGGACACATCAAACCCCTAACCTGACTCAGATGTTGTCCGAGTACCATGATAATCTCTGCCAACCTAAGGCAATTCCAGTATCAAAACCAAACTTTACTGGCCTATCAGATAATAGAGTTGTGGAGGCACAAGTGATAACCTCAAATCTTAAATCATGTCCTCAACAACCTGCATTCAATGAATTGAATGAGGTTGGCCAATCAAGTCTGAGTGACTACAGCATGAAGTTTAATGAACAACAAACTTTATCTGGTAGTGGGAGTCAGAATTACGTCAATTCTCTTATAAATGCATCAAGTAATTTTAGCATGACTCAAATGAAGACAAACGGAGGCCATATGCCTGACCATAGTCAAAATTTTGTTAGTACTCCATTACTTGGAGGAATCCCGATTCATCGTGGAATGAGTAACCTGTTGAGGTCAAGTTTTATTAACACCTCTGTTTCAGAACCTCCCAAAGTTGGTGCTGCTGATTTTTCTGGAACTCATAAAGTTGGGACTGGACTTCAAAATGATGATTCAACTAAAATGGGGGCTTTTACTTTCCCTTATGTTGCAAATCAATTAGATGCTTGTGACAGGCCTCTGGAAAGCTCTGATCAGAAGAATCTTCCCTGTTATTTTAAGTGTGCTCGTGACAAGTTGGGTCGAAATGATCAAATGATAGATGGTGATTTGTTTCAGGCCCTTAAGATCCCATCTCTTCATCTTGAGGAGCATGTGCCCATGAGTGATCAAATTATGGGTTTTGGCAATGGTTCCCCCAATAATGATGTTACAACTGAATCTTTCACAAAGCAAGAAGCTTATGCTCAATCTTCATCAGGAGATGACCTATTTGATGTTTTAGGTGTGGATTTTAAAAACAAAACACTGAATGAAAACTGGAATAAGTTGCTTTCTGATGAAACAGATGGTAATGTGATAGTCCTGGATAAGAAGGCAGCATTTATGAATATGCAGAGCTTAGACGCTGATTGCTATTCAGTTAATGAGACAGTATCAGATAGTGGCATTTTCTCTGGGAGGGGCACTGATCACCTTTTGGATGCTGTGGTCTCAAGAGCTCAATCTGCTGTGAAACAGGATTCTGATGGCATGTCTTGCAGGACAACCGTGACTAGGATCAGCGGTGCCTCTGTTCCCTTTTCTTCCCACAAGCAGGTTATGTCAGATCATGCCCTTGGTGGATTGTTGAACTTTCCCAAGACTGAGGGTAAATTAAGTGCTGCAGAAACTTGTTCTCTTCGGTCTGGTTGTCACAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCATTTATGGCTCTCAACTCAGTTCATGGGTTGAGAATGTTGGCAATGTGAAGCGTGAAAACAGTGTTTCAACTGGATACTCTAAGCGACCAGATGAAGTTGGCAAATCAAATCGCAAAAGGCTTAAACCTGGGGAGAATCCAAGACCTCGACCTAAAGATCGCCAAATGATTCAAGACCGGGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGCGCAAAATGTAGCATTGATGCGCTTCTTGAACGGACCATAAAGCACATGCTTTTCTTGCAAAGTGTAACAAAGCATGCCGACAAGCTGAAACAAACAGGGGATTCCAAGATTATCAATAAGGAAGGTGGGCTGCTTCTAAAAGATAATTTTGAAGGAGGGGCTACATGGGCATACGAGGTTGGCTCACAATCCATGGTTTGCCCTATCATAGTTGAGGATCTTAATCCGCCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGGGGTTTCTTTCTGGAGATAGCTGACTTGATCAGGGGAATGGGTTTGACCATTTTAAAGGGGGTAATGGAAGCTCGAAATGACAAGATCTGGGCACGCTTTGCTGTGGAGGCGAATCGGGATGTGACGAGGATGGAAATATTTATGTCACTGGTTCATCTTCTGGAACAAACAACGAAGGGTGGTGCAGCGGCATCTACACTGAACGAAAGCAACATGATGGTTTATCACTCCTTCCCACAACCTACTCAGATACCTGCAACCGGGATACCTGGTAGTTTGCAATGA 2778 0.4269 MCGRNQWSYAVFWKIGRHNPKLLIWEECYYESLPCPFPPNNDRTGASNLPFGGSEGDRVCSLINKMMVNNSVNIAGEGIIGRAAFTGNHQWILLNNFTRAAYPPEVYNEVHHQFLAEIQTIVFIPVHPHGVVQLGSFLAIMEDVGFVNDVRSLIFQLGCVPGVLLSEDYSSKVSAQGLGATVTVGVPVSVDLPVTSDCSPSVASGSNQQSNLSHTSNSVVHQSLPHREEVNNGQVSVWTHQTPNLTQMLSEYHDNLCQPKAIPVSKPNFTGLSDNRVVEAQVITSNLKSCPQQPAFNELNEVGQSSLSDYSMKFNEQQTLSGSGSQNYVNSLINASSNFSMTQMKTNGGHMPDHSQNFVSTPLLGGIPIHRGMSNLLRSSFINTSVSEPPKVGAADFSGTHKVGTGLQNDDSTKMGAFTFPYVANQLDACDRPLESSDQKNLPCYFKCARDKLGRNDQMIDGDLFQALKIPSLHLEEHVPMSDQIMGFGNGSPNNDVTTESFTKQEAYAQSSSGDDLFDVLGVDFKNKTLNENWNKLLSDETDGNVIVLDKKAAFMNMQSLDADCYSVNETVSDSGIFSGRGTDHLLDAVVSRAQSAVKQDSDGMSCRTTVTRISGASVPFSSHKQVMSDHALGGLLNFPKTEGKLSAAETCSLRSGCHKDDAGNCSQTTSIYGSQLSSWVENVGNVKRENSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTTKGGAAASTLNESNMMVYHSFPQPTQIPATGIPGSLQ 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0385 925 CDD bHLH_AtLHW_like 716 785 - -
Lele32g0385 925 MobiDBLite consensus disorder prediction 691 725 - -
Lele32g0385 925 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 712 761 IPR011598 GO:0046983
Lele32g0385 925 MobiDBLite consensus disorder prediction 199 222 - -
Lele32g0385 925 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 1 153 IPR025610 -
Lele32g0385 925 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 919 IPR043561 GO:0003700|GO:0006355
Lele32g0385 925 MobiDBLite consensus disorder prediction 702 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0385 Lele-ChrLele32 2386235 2391359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0385 510 898 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.177 3.23e-120 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1039 11 17576480 17591225 Lele32g0385 32 2386235 2391359 CCT
Lele09g1039 09 19568285 19571390 Lele32g0385 32 2386235 2391359 CCT
Lele10g0991 10 21275510 21279173 Lele32g0385 32 2386235 2391359 CCT
Lele32g0385 32 2386235 2391359 Lele09g1029 09 19469420 19472018 CCT
Lele32g0385 32 2386235 2391359 Lele10g0982 10 21113995 21116420 CCT
Lele32g0385 32 2386235 2391359 Lele11g1032 11 17498418 17501019 CCT
Lele32g0385 32 2386235 2391359 Lele12g0294 12 2669191 2671602 CCT
Lele29g0404 29 2443016 2448690 Lele32g0385 32 2386235 2391359 hybridization
Lele30g1006 30 13526029 13531348 Lele32g0385 32 2386235 2391359 hybridization