Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0377 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCTGCTATTTTAGTCCATCACAAGGCTGAGAAAAAGAAATACGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGATGCAGGAGATCTGCTCATCAAGAGATGGCTCTTATTGCCCGAGTCCAGCACCCTTACATCGTGGAATTTAAGGAGGCATGGGTTGAGAAGGGATGCTATGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGACTCACTTTCCTGAGGAGAAACTCCTTAAGTGGTTTGCCCAGTTACTGTTGGCAGTGGAATACTTGCATTCTAACTTTGTTTTACATCGAGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCATGATGTTCGCCTAGGGGATTTTGGGCTTGCTAAGACCTTAAAAGCAGATGATCTAGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAATTGCTTGCAGATATTCCTTACGGATTTAAATCTGATATTTGGTCGCTAGGTTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTCGATATGGCAGGTTTGATAAGCAAGATAAATCGTTCCTCCATTGGTCCTTTGCCTCCCTGTTATTCCCCATCTTTGAAAACGCTGATAAAGGGCATGCTGAGGAAAAACCCTGAGCATCGACCAACAGCATCTGAGATCTTAAAGCATCCTTATTTGCAATCTTACGTTGAACAGTATCGTCCATCTTTCGGTCCTCCAACATCCTGTTCTCCTGAAAAGCCTATTCCTGTTACCCATGATCCTCGAAGAAATATGGCTGAAAGTCAAAACAGTAGCAGTTCAAGCGGCGATAAAGATAGTTTAATGTCAAATGACAAAATCATTTCAGCAGTGGTGCAGAATTTCAATAACAGAACCACTGAGACAGATGTAACCTCCATTGATGACAACGATGGCTCTGAGCATATCCTGCCTAGCGAAGAAGATACTAGCTCCAACGCTAGCAATGCTAAAGCAGATTGCCAGGAGGTGATGAAACCATCATCTAGTGAACGTCAATCAATTGTTGAATCCAAGCCACCAAAAACAATTAAAAACATAATGATGGCGCTAAAAGAAGGAAAGGTTAGAGAAAATGGTTCTCCAATGAGAGGCAACCGCATTAAGGCTGTTGGTGCTTCGGCACAGAAAACAAACGCAGATACATTGCCTAAATTGCCCAAGTCTAATGGTGTTGCTCCTGGTATCAAGCCAAATTTAGAGTCTCCAACTTTGACATCTGCAAAGACATCCCCTGATCCTCCAAAACGAATGCCAAGGTCGCATCCTTTAAAGAATCAGGCACTACTGATGATGGACTCTTCACCAAAAACCAAACCCAGACACGATGGGACTCCCCCATCTGGTCCTATTAAACAAGTTGAAGGAGATGGAGTCTCTGCCAAGGTGAGGCAAGGGACCCCCCCTAGTTTACTTAGACAGCCTTCATTCCGAGGAGGAATGAGGCAGGTTGGACTTGATGTACGCAATGCAGCTAATGATACAGAGAAGTTAGGTCCAAAAAAAATATTGCAGGAGCCAGACAAGAGTCTTTATAAGGTGCTCAGCGATCATATGCCACTTGCTTCTAGAGAGGTTACAGAGCCTCAGAAGGCTTCTGAAAAATGTTCCAAAGGAATGCAGGCTGATAACAGTAATTCTGTTTCATCTTCAGTGTCTATTCAAGGATATGAACTTTCTGATGATGCAACAAATTTTATTGACATGAGAGAACAGACGCATTCTATAAATGAGAGTGCAACACATATTGAAACTATACAGTCACATCCAGACAAGAGCCATTATCAGTCACCCAATGGTCATATACCATGGGTTTCTGGAGAGATTACTGAGCCTCAGAAGGCTTCTGAAAAATGTTCCAAAGGAATGCAGGCAGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATACAAGGATTTGAACTTTCTGATGATGCATCAAATTTTTTTTATATGAGAGAAGAGACGCCTTCTGATCATGGGAGTGCAACACATATTGAAACTATAAAATCACGCCCACCTGCTACCTATTTGCACTCTGAGATGGCTGAAACTATATCTAGGGAAGCCTCTGAACCCGGCTTGAATCTTCAGAATACAATTACTGATAATGAGAAAGGCATTTCCGGTTTAACTCTTGATTCCCATGCTCCAGATTCCAAGGAAATATTGGCTTCTGAAGATAGTCTCTACATCAATCAGACAAGTACTTTTGCTGCCACCTCATGTGATAATATATCTACAAGTCTCTCTGTTAAAGCCAACAAAGAAATTAAAGATCTTCAAGATACTACTAAGCAAGTGACTTCAATCCATCCTCCGAAACTTCCACTATTGAGTGCTGGAGAAAATTTTGTTTGTGAGGAAGTCGCTCCAGTAAGCAAGCCCAGTAATAGGTCTGACACAGTTAGCCGGCCAAAACCTGTGCTGGAGTCCACTGGTGATGATAAGTTCACTGTTAAGGAAAGACTGTCATCTGCGGCTGAAACTGCTCCACCAATCACCTCTACCAATGACCAAAAAGGCTCCCAAGAAGATAAAGGAACCATTTTGTATAATCCAATGATAGAAAGGCCAGCTGTTGGTAATCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGACACAGCAGTTTCCGAGTTGGGAGTGAGCAACCAGTAAGGGAATCTGTGGAGATGGGAGTTCAAAACGTGGATGTTGGTAAATTTCTCAACGTTGTAAGGGATGATTTAGAAATGAGAACCACGGGCTCTCCTCTGACCCACAATTCTTCAAATTGCTCTGAAGCTGCGAGCTTGAAGTCAAGCATTTCCGATCAATTAGACGTGAGAAGCATGAGCACTGCTCCAGCTCTAAAACCCTCGAGTTGCTCCGATGCTCTGTGCACAGAACCAAGTGTCTCTGATCATTCCAGTATGAAGGAACAAGATGTGAAAAATCTTGTTCCTTCAGTATCAAAATCCGATTCCCCTGAGTTGACAAAATGCAACTCTTCAGTGACCGAAGAGGAAACCCCAGCAAAGGAAACTTTGGATGTTAAATCATTTAGGCAGAGAGCAGATGCTCTTGAAGGGCTCTTGGAGTTGTCTGCAGAGTTACTGCAACAAAATAGATTGGAGGAGCTTGCTGTTGTTCTAAAGCCCTTTGGGAAAGATATGGTATCCCCAAGAGAGACGGCTATTTGGTTGGCTAAGAGCATAAAGGGAATGATGAACGACGACAATGGTGGACGTTGA 3369 0.4301 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGTHFPEEKLLKWFAQLLLAVEYLHSNFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEILKHPYLQSYVEQYRPSFGPPTSCSPEKPIPVTHDPRRNMAESQNSSSSSGDKDSLMSNDKIISAVVQNFNNRTTETDVTSIDDNDGSEHILPSEEDTSSNASNAKADCQEVMKPSSSERQSIVESKPPKTIKNIMMALKEGKVRENGSPMRGNRIKAVGASAQKTNADTLPKLPKSNGVAPGIKPNLESPTLTSAKTSPDPPKRMPRSHPLKNQALLMMDSSPKTKPRHDGTPPSGPIKQVEGDGVSAKVRQGTPPSLLRQPSFRGGMRQVGLDVRNAANDTEKLGPKKILQEPDKSLYKVLSDHMPLASREVTEPQKASEKCSKGMQADNSNSVSSSVSIQGYELSDDATNFIDMREQTHSINESATHIETIQSHPDKSHYQSPNGHIPWVSGEITEPQKASEKCSKGMQADSSNSVSSSVSIQGFELSDDASNFFYMREETPSDHGSATHIETIKSRPPATYLHSEMAETISREASEPGLNLQNTITDNEKGISGLTLDSHAPDSKEILASEDSLYINQTSTFAATSCDNISTSLSVKANKEIKDLQDTTKQVTSIHPPKLPLLSAGENFVCEEVAPVSKPSNRSDTVSRPKPVLESTGDDKFTVKERLSSAAETAPPITSTNDQKGSQEDKGTILYNPMIERPAVGNLPPAFDDVIHVIRHSSFRVGSEQPVRESVEMGVQNVDVGKFLNVVRDDLEMRTTGSPLTHNSSNCSEAASLKSSISDQLDVRSMSTAPALKPSSCSDALCTEPSVSDHSSMKEQDVKNLVPSVSKSDSPELTKCNSSVTEEETPAKETLDVKSFRQRADALEGLLELSAELLQQNRLEELAVVLKPFGKDMVSPRETAIWLAKSIKGMMNDDNGGR 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0377 1122 MobiDBLite consensus disorder prediction 334 348 - -
Lele32g0377 1122 MobiDBLite consensus disorder prediction 331 380 - -
Lele32g0377 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lele32g0377 1122 MobiDBLite consensus disorder prediction 872 889 - -
Lele32g0377 1122 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Lele32g0377 1122 MobiDBLite consensus disorder prediction 477 520 - -
Lele32g0377 1122 CDD STKc_Nek 7 262 - -
Lele32g0377 1122 MobiDBLite consensus disorder prediction 567 592 - -
Lele32g0377 1122 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Lele32g0377 1122 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0377 1122 MobiDBLite consensus disorder prediction 272 311 - -
Lele32g0377 1122 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Lele32g0377 1122 SUPERFAMILY Protein kinase-like (PK-like) 4 323 IPR011009 -
Lele32g0377 1122 MobiDBLite consensus disorder prediction 349 380 - -
Lele32g0377 1122 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0377 1122 MobiDBLite consensus disorder prediction 293 311 - -
Lele32g0377 1122 MobiDBLite consensus disorder prediction 415 465 - -
Lele32g0377 1122 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0377 1122 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1072 - -
Lele32g0377 1122 MobiDBLite consensus disorder prediction 834 889 - -
Lele32g0377 1122 Gene3D Transferase(Phosphotransferase) domain 1 90 338 - -
Lele32g0377 1122 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0377 Lele-ChrLele32 2340454 2346891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0377 14 264 MAP Kinase Kinase Kinase AT1G53570 31.641 1.45e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele32g0377 Pkinase 3.6e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0398 29 2400450 2408212 Lele32g0377 32 2340454 2346891 hybridization
Lele30g1013 30 13577188 13583660 Lele32g0377 32 2340454 2346891 hybridization