Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0373 ATGTCTTCTTCCTCTCATACCCCGGACCAGATCATTCACTCCATGAAACGGCAACTCCCATTCTCGTCTATGAAGCCCTCCTTTGTTGCTCCCGCTGATTACCATCGCTTCGCTCCCGACCAACGCCGACCTGCTGACCAAGAAGCCGAAACCATCGTCGTTAAGTCACCTCAATTGAAGCGAAAGATTACCACAGCCAATTCTGAAGCTGATTCCGTTGATAGGATGAACCCAGGATCTAATGAAGCAGCTAATAGCGCCTTTCAGACTCCATTGTCAGGAAAAATGGGGAAGGCGGGCAAAGCATCAAAGCTTACAAGAGGCAGCAAAGCTGGACCTCAAACACCAGGATCAAATATTGGTTCTCCTTCTGGCAACAGTCTTACTCCAGCTGGTCCATGTCGTTATGACAGCTCTTTAGGTCTGTTGACAAAAAAGTTCATCAACTTGATTAAGCAAGCTGAGGATGGTATTCTTGATTTGAATAAAGCTGCGGATACATTAGAGGTGCAAAAGAGGAGAATATATGATATAACAAACGTTCTTGAAGGGATTGGTCTTATAGAAAAGAAGCTCAAAAACAGAATTCAATGGAAGGGATTAGACGTGTCAAGGCCAGGGGAATCTGATGATAGTTTTTCTAGTTTGCAGACAGAAATTGAAAACCTTACTTTGGAAGAGCGCCAGTTAGATGAGCAAATAAGGGAGATGCAAGAAAGACTGAGGAAATTTAGTGAAGATGAAAACAATCAGAAGTGGCTTTTTGTTACGGAAGATGATATAAAGGGTTTGCCCTGCTTCCTGAATGAAACCTTAATAGCTATTAAAGCTCCACATGGCACCACTCTTGAGGTCCCTGATCCTGATGAGGCTGTTGATTATCCCCAAAGGAGATACAGGATAATCCTCAGAAGCACAATGGGCCCGATAGATGTTTACCTTGTTAGTCAATTTGAAGAAAAATTTGAGGAGGTCCATGGAGTGGACGCACCCCCCAATCTTCCATCCACACCAGAGTTTAACAGGCATCCAGCAACAGTGATCCCTGAGGATAGAGGGAAGGACAAAGAAATGCAGGAACAAGATGGTCATAGAGCTAGTCCTGATTTGAGTTCCTCACAGGACTTTGTTAGTGGGATCATGAAGATTGTGCCGTCAGATGTTGATAGTGATGCTGATTACTGGCTTCTATCAAACGCTGATGTTAGCATAACAGACATGTGGAGAACAGAATCTGGAATTGAATGGAACGAACTGGACGCACTTAATGAAGATTATTGCATGCCTCAGGAGAGCACAGCACGACCTGAAACTCCTCCAAACACGAGTCAGGTGCCTTCTACATCTAACCCTAACGGAGGCTGA 1365 0.444 MSSSSHTPDQIIHSMKRQLPFSSMKPSFVAPADYHRFAPDQRRPADQEAETIVVKSPQLKRKITTANSEADSVDRMNPGSNEAANSAFQTPLSGKMGKAGKASKLTRGSKAGPQTPGSNIGSPSGNSLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGESDDSFSSLQTEIENLTLEERQLDEQIREMQERLRKFSEDENNQKWLFVTEDDIKGLPCFLNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEVHGVDAPPNLPSTPEFNRHPATVIPEDRGKDKEMQEQDGHRASPDLSSSQDFVSGIMKIVPSDVDSDADYWLLSNADVSITDMWRTESGIEWNELDALNEDYCMPQESTARPETPPNTSQVPSTSNPNGG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0373 454 Gene3D - 208 317 - -
Lele32g0373 454 SUPERFAMILY E2F-DP heterodimerization region 213 317 IPR037241 -
Lele32g0373 454 Coils Coil 151 171 - -
Lele32g0373 454 MobiDBLite consensus disorder prediction 62 92 - -
Lele32g0373 454 Gene3D - 129 202 IPR036388 -
Lele32g0373 454 Pfam E2F/DP family winged-helix DNA-binding domain 137 200 IPR003316 GO:0005667|GO:0006355
Lele32g0373 454 MobiDBLite consensus disorder prediction 108 132 - -
Lele32g0373 454 CDD E2F_DD 211 317 IPR032198 GO:0046983
Lele32g0373 454 Coils Coil 213 247 - -
Lele32g0373 454 MobiDBLite consensus disorder prediction 426 454 - -
Lele32g0373 454 SMART E2F_TDP_2 135 200 IPR003316 GO:0005667|GO:0006355
Lele32g0373 454 FunFam E2F transcription factor 1 129 202 - -
Lele32g0373 454 Pfam E2F transcription factor CC-MB domain 216 316 IPR032198 GO:0046983
Lele32g0373 454 MobiDBLite consensus disorder prediction 434 454 - -
Lele32g0373 454 MobiDBLite consensus disorder prediction 329 373 - -
Lele32g0373 454 MobiDBLite consensus disorder prediction 345 364 - -
Lele32g0373 454 PANTHER TRANSCRIPTION FACTOR E2F 77 414 IPR015633 GO:0000978|GO:0006357
Lele32g0373 454 MobiDBLite consensus disorder prediction 62 132 - -
Lele32g0373 454 SUPERFAMILY "Winged helix" DNA-binding domain 135 198 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0373 Lele-ChrLele32 2318284 2322572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0373 14 453 E2F-DP Transcription Factor Family AT5G22220 55.437 1.91e-159 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lele32g0373 E2F_CC-MB 9.2e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1017 30 13601360 13605652 Lele32g0373 32 2318284 2322572 hybridization