Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0358 ATGTCGCGTCTGATGTTTACTTGTGTGTGTCTTTATACAGAGCTTGCGGGAGAGGTGTGTCGTGGAGATACAGAGCAGTGGTTCTTCTTCTCGCCGAGGCAAGAAAGAGAAGCCAGAGGAGGAAGACCCAACAGAACCACTGCTTCGGGATACTGGAAAGCCACCGGTTCTCCTAGTTACGTTTACTCTTCCAATAACAGAGAAATCGGCGTGAAGAAAACGATGGTGTTTTACAGAGGCAAAGCTCCGACTGGAAGGAAAACCAAGTGGAAGATGCATGAATACAGAGCCATCGAACCCTCCAACTCTGACCAAGCAGCCGCCTTCATTCCCACGGAAGCTCGTCGGATACTTCAAACTCAGGAGCAGACCATGCAGAAGCTGGAGATCGAGCGGTACAAATCGGAATAA 411 0.4964 MSRLMFTCVCLYTELAGEVCRGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPSYVYSSNNREIGVKKTMVFYRGKAPTGRKTKWKMHEYRAIEPSNSDQAAAFIPTEARRILQTQEQTMQKLEIERYKSE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0358 136 Pfam No apical meristem (NAM) protein 19 96 IPR003441 GO:0003677|GO:0006355
Lele32g0358 136 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 102 - -
Lele32g0358 136 ProSiteProfiles NAC domain profile. 1 113 IPR003441 GO:0003677|GO:0006355
Lele32g0358 136 SUPERFAMILY NAC domain 17 104 IPR036093 GO:0003677|GO:0006355
Lele32g0358 136 Gene3D NAC domain 8 130 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0358 Lele-ChrLele32 2233304 2233958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0358 15 99 NAC Transcription Factor Family AT3G44350 81.176 2.38e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele32g0358 NAM 2.3e-17 No_clan