Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0342 ATGTGGACGCTGCCGGAGGCTCTACCCCCATCGGCATGGACGCCGAGACTTTGGGGTATAAAGGCAAGGCCTTTTGCCGTCGGACCCTGCAGTGAAGACTGTTCGCGCAATCAAGGGTCTGTTTTTGATTTTGGAGAGCTGGAAGAAACAATTGTTCTGCAAGGAGTAGAGATTAGAAGTGATGAAGGCAGAGCACGTACGGGAGGATCAAAGTCAGGAGGAGAAAGCACAGATTCAGGATCAGGTGTTAACAACACCATAGCAAGCAAAAGTGAGCCTCAGTTTGAATTTGAACCAGAATCTCCCATTAGTAATAGGACAGCAACTTCTTCAGAGCTTCATCATCCGAAGCAACTTCAACAGGAGATGGCGAGTGATGCTTCAAGAACAGGCGCATCACAGTCACAGAATCAGTCACCAGCAAAATCGTCTCAGGAAAAGAGAAAGGGAGCTACTGGTTCTTCATCGGAAAAGCAACTTGATGCAAAGACACTGAGACGTCTAGCTCAAAACAGAGAAGCTGCTCGGAAGAGCCGTCTGAGGAAAAAGGCTTACGTGCAGCAGCTAGAGACCAGTAGGATAAAGCTTACCCAACTTGAACAAGACCTTCAAAAAGCTCATTCTCAGGGCCTGTTTTTAGGCTACGCTGGTGCCGGTGGAAACATAAGCTCTGGAGCTGCCATATTTGACATGGAATATGCAAGATGGTTAGAGGAAGACCACCGGCACATGACGGAGTTGCGGGCGGCGCTTCAGTCGGCGTTATCGGACAGCGATTTAAGAATAATGGTTGACGGATATCTGTCGCATTACGATGAGATCTTCAGGCTGAAAGAAGTCGCTGCAAAATCAGATGTGTTTCATCTTATTACTGGCATGTGGACTTCTCCTGCTGAACGCTGCTTCCTCTGGATGGGTGGTTTCAGACCCTCTGAACTCATCACGATGTTGATACAGCAGTTGGAGCCGTTGGCGGAGCAGCAGATTATGGGAATGTATGGCCTCAGACATTCCTCACAACAAGCTGAAGAGGCTCTCTCTCAAGGCCATGAGCAACTCCAGCAGTCCCTCGTCGACACCATCGCCGTCGGCCCCGTCGGCCACGGCGTGCAACAGATGGTTATCGCCATGAGCAAGCTCTCCAATCTTGAAGGATTCGTCCGCCAGGCGGATAACTTGAGGCAGCAGACACTGCAACAGTTATGTAGATTGCTGACAATTCGGCAAGCAGCGAGATGCTTCCTTGTAATGGGAGAGTATTATGGTCGCCTTCGTGCTCTTAGTTCTCTCTGGGCTTCAAGACCTCGAGAGACGATGATGAACGAGGATAACTCATGTCAAACGACGACGGAGCTGCAAATGGTGCATCATCCGAATCATTTTGGCGGATTCTGA 1395 0.4961 MWTLPEALPPSAWTPRLWGIKARPFAVGPCSEDCSRNQGSVFDFGELEETIVLQGVEIRSDEGRARTGGSKSGGESTDSGSGVNNTIASKSEPQFEFEPESPISNRTATSSELHHPKQLQQEMASDASRTGASQSQNQSPAKSSQEKRKGATGSSSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQDLQKAHSQGLFLGYAGAGGNISSGAAIFDMEYARWLEEDHRHMTELRAALQSALSDSDLRIMVDGYLSHYDEIFRLKEVAAKSDVFHLITGMWTSPAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAVGPVGHGVQQMVIAMSKLSNLEGFVRQADNLRQQTLQQLCRLLTIRQAARCFLVMGEYYGRLRALSSLWASRPRETMMNEDNSCQTTTELQMVHHPNHFGGF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0342 464 MobiDBLite consensus disorder prediction 55 164 - -
Lele32g0342 464 Coils Coil 182 209 - -
Lele32g0342 464 MobiDBLite consensus disorder prediction 70 159 - -
Lele32g0342 464 ProSiteProfiles DOG1 domain profile. 226 434 IPR025422 GO:0006351|GO:0043565
Lele32g0342 464 Pfam bZIP transcription factor 162 205 IPR004827 GO:0003700|GO:0006355
Lele32g0342 464 Pfam Seed dormancy control 243 318 IPR025422 GO:0006351|GO:0043565
Lele32g0342 464 FunFam BZIP family transcription factor 162 211 - -
Lele32g0342 464 SMART brlzneu 159 224 IPR004827 GO:0003700|GO:0006355
Lele32g0342 464 Gene3D - 162 210 - -
Lele32g0342 464 PANTHER TRANSCRIPTION FACTOR TGA9 105 437 - -
Lele32g0342 464 SUPERFAMILY Leucine zipper domain 163 206 IPR046347 GO:0003700|GO:0006355
Lele32g0342 464 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 205 IPR004827 GO:0003700|GO:0006355
Lele32g0342 464 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0342 Lele-ChrLele32 2141507 2152390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0342 123 464 bZIP Transcription Factor Family AT1G08320 70.145 1.80e-177 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele32g0342 DOG1 1.2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele32g0342 32 2141507 2152390 Lele09g1056 09 19811884 19812342 CCT
Lele32g0342 32 2141507 2152390 Lele10g1020 10 21603517 21604706 CCT
Lele32g0342 32 2141507 2152390 Lele12g0260 12 2250237 2250788 CCT
Lele29g0353 29 2180761 2186817 Lele32g0342 32 2141507 2152390 hybridization
Lele30g1051 30 13794517 13796815 Lele32g0342 32 2141507 2152390 hybridization