Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0334 ATGACATATGGAAGAGCCACATGCAACCGTACCGATAACCTAGCACCACATCTCTCCCTCCATCGAGGTGCTTTTCTTTTCCTTGCCTTCTTTATTTCTCTTCTTTGCCGATTCCCATCTCTGATCCCTCTTCTAATCTCACAAACCCCTCTTTTCTCTGTCGGCGTATTTTGCTCGTTTTGCTGATCGTTATATCTCTCGTCGGGATTGGACCGACTACGATCAAAGAAGATGGCGGGAGAACATAGATGCCAAGCTCCGCAACTCTGTTCCAACAACTGCGGCTTCTTCGGCAGTCCTGCGACGCAGAATCTATGCTCCAAATGCTACAGAGATTTACAGCTGAAGGAGCAACAGTCCTCCTCGGCCAAGCTGGTTCTCAATCAATCCATAGTCCCTCAGCCGTCCGCGGCGGAGAAATCGGAATCGTCTTCGTCGTTACTGGAACCGGTTGCCGATCTTTCGTCTCCGGTTGTTGCTGCGGTTGATCCGGCGCTTCCGGCGGAGGAGCCGAAGAGCGTGACAGCGACTCCGCCGAATAGGTGCATGACGTGCAGGCGGCGCGTGGGGCTCACGGGGTTCAAGTGCCGGTGCGGGTTGACTTACTGCGGGGCTCACCGCTACGCGGAACAGCACGGGTGTGAGTTCGACTTCAAGACGATGGGCCGGGAGCAGATCGAGAAGGCCAATCCAATAGTGAAGGCCGATAAACTCGAAAAGATCTAA 726 0.5386 MTYGRATCNRTDNLAPHLSLHRGAFLFLAFFISLLCRFPSLIPLLISQTPLFSVGVFCSFCXSLYLSSGLDRLRSKKMAGEHRCQAPQLCSNNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSIVPQPSAAEKSESSSSLLEPVADLSSPVVAAVDPALPAEEPKSVTATPPNRCMTCRRRVGLTGFKCRCGLTYCGAHRYAEQHGCEFDFKTMGREQIEKANPIVKADKLEKI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0334 241 ProSiteProfiles Zinc finger AN1-type profile. 176 222 IPR000058 GO:0008270
Lele32g0334 241 Pfam AN1-like Zinc finger 182 218 IPR000058 GO:0008270
Lele32g0334 241 ProSiteProfiles Zinc finger A20-type profile. 84 118 IPR002653 GO:0003677|GO:0008270
Lele32g0334 241 PANTHER AN1-TYPE ZINC FINGER PROTEIN 86 241 - -
Lele32g0334 241 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 89 135 - -
Lele32g0334 241 SUPERFAMILY AN1-like Zinc finger 168 236 IPR035896 -
Lele32g0334 241 FunFam Zinc finger AN1-type containing 6 158 237 - -
Lele32g0334 241 Pfam A20-like zinc finger 88 111 IPR002653 GO:0003677|GO:0008270
Lele32g0334 241 SMART A20_3 87 111 IPR002653 GO:0003677|GO:0008270
Lele32g0334 241 Gene3D - 77 146 - -
Lele32g0334 241 Gene3D - 158 237 IPR035896 -
Lele32g0334 241 SMART AN1_Zf_4 182 219 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0334 Lele-ChrLele32 2086632 2089622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0334 78 241 C2H2 Transcription Factor Family AT3G52800 53.179 6.25e-45 147