Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0327 ATGCCGTTATCGGACCGTGGCCTGCCCCTGGCTCTCGACCCAAACGTCCCCTTCAGTTCGAGCAGGCCTACCTCGATGCTTTACCCTCCGCAAACATTTTCTCGAGCAGCTGAAAATGTGTTCTTTTCTTGGTATGAGAAAAGTTATATGCATCGTGATGTAGTTATACATCTTGCTGTTTCAGCTGCAGAAATTTTCATAACAGGGAGGCAGTTGAAGTTTTGGAAGAAAAAGCCTATGGGTATTGAATTTGCAAAACACTTCAGATCCCATCTTGGTCCAATTGAAGGTCAGTCCAGATGGAAAGCAATTTTTCATAAGATCACCCGATTGCAGGATACGTGTGTTTTGGTTCAAAACAGTCGGAGAGATGTGTTCAATGAAAAGCCTCCTGCTGATGAACTTTTGGCAGTCTCAGATATTGGAAAGGCAGTTACAACATCACTTCCGGACAGTGTGAGGAATGTCCAAAAACTGGAGAACTTTACAACTCACTGTCGGAATGGCTATTATGATAGCCTTATTTTTCACCGAGTTATTAAAGGCTTCATGATACAAACAGGTGATCCCTGGGAGATGGCACCGGTGGGCACTCTATTTGGGGGGAGGGAATTTGAGGATGAATTTCACGAAAGACATGATAGGCCTTTCACAGTATCGATGGCAAATGCGGGCCCAAATACAAATGGTTCTCAGTTCTTTATCACCACCGTGGCCACTCCTTGGCTGGACAACAAGCACACTGTATTTGGCAGGGTTGTGAAGGGAATGGATGTCGCTATAGAAAAAGTGAAGACGGACAAGACGGACAAGCCATATTAA 822 0.4477 MPLSDRGLPLALDPNVPFSSSRPTSMLYPPQTFSRAAENVFFSWYEKSYMHRDVVIHLAVSAAEIFITGRQLKFWKKKPMGIEFAKHFRSHLGPIEGQSRWKAIFHKITRLQDTCVLVQNSRRDVFNEKPPADELLAVSDIGKAVTTSLPDSVRNVQKLENFTTHCRNGYYDSLIFHRVIKGFMIQTGDPWEMAPVGTLFGGREFEDEFHERHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVAIEKVKTDKTDKPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0327 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 176 188 IPR002130 GO:0000413|GO:0003755
Lele32g0327 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 232 244 IPR002130 GO:0000413|GO:0003755
Lele32g0327 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 232 IPR002130 GO:0000413|GO:0003755
Lele32g0327 273 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 245 260 IPR002130 GO:0000413|GO:0003755
Lele32g0327 273 SUPERFAMILY Cyclophilin-like 160 272 IPR029000 -
Lele32g0327 273 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 159 272 IPR002130 GO:0000413|GO:0003755
Lele32g0327 273 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 171 188 IPR020892 GO:0003755|GO:0006457
Lele32g0327 273 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 159 272 IPR044666 -
Lele32g0327 273 Gene3D - 141 273 IPR029000 -
Lele32g0327 273 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 160 273 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0327 Lele-ChrLele32 2024139 2029270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0327 157 272 U-box Gene Family AT5G67530 45.833 7.12e-26 104