Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0326 ATGGGGGAAATGATGACGCTGCAAAATTCTGGAGGGAACCTTGTTAATTTACGATTTTGCCACTGTCCTCAATTCCTCTCGAACGCATCATTTCTTATTCCTTCATCACGAGTTACTTGCCTTTCTCTCAGAACACACGCTACTGCAATTTCCTACAAGCATAATCTCTTATCTCCTTCTGGCTCGTCGTCGATTCAAGCATCGATGGCGTCTTCTACCTCATCCGTTGGCACAGAGGATACGAAGCCATTCTCTGTGCTCTTTGTTTGCCTCGGCAACATCTGTAGGAGCCCAGCCGCTGAAGGAGTCTTCAGACACTTGGTCAACAAAAGGGCTTTAGATTCCAAGTTCAAAATTGATTCTGCTGGCACCATTAATTACCATGAGGGAAATGAAGCAGACCCAAGGATGAGAGCGGCCTCAAAAAGGCGTGGAATTCAGATAACCTCTATTTCAAGGCCAATCCAACCATCTGATTTCCGAGATTTTGATCTTATTCTTGCTATGGACAAGCAAAACAGAGGGGACATATTAGAGGCATTCAATAGATGGAAGTCTAGAGATACTTTGCCAGCTGATGCATATAAGAAGGTTAAATTGATGTGCTCATATTGTAAGAAACATGATGAAACTGAAGTCCCTGATCCTTACTATGGCGGACCACAAGGGTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCTTGTGAATCATTGTTGGACGAAGCTTTGGCAGAGCATAAGTATTTACAAGAATGA 756 0.4312 MGEMMTLQNSGGNLVNLRFCHCPQFLSNASFLIPSSRVTCLSLRTHATAISYKHNLLSPSGSSSIQASMASSTSSVGTEDTKPFSVLFVCLGNICRSPAAEGVFRHLVNKRALDSKFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIQPSDFRDFDLILAMDKQNRGDILEAFNRWKSRDTLPADAYKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDEALAEHKYLQE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0326 251 FunFam Low molecular weight protein-tyrosine-phosphatase 83 247 - -
Lele32g0326 251 PRINTS LMW phosphotyrosine protein phosphatase signature 213 228 IPR017867 GO:0004725|GO:0006470
Lele32g0326 251 PRINTS LMW phosphotyrosine protein phosphatase signature 86 103 IPR017867 GO:0004725|GO:0006470
Lele32g0326 251 PRINTS LMW phosphotyrosine protein phosphatase signature 129 145 IPR017867 GO:0004725|GO:0006470
Lele32g0326 251 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 16 247 - -
Lele32g0326 251 Pfam Low molecular weight phosphotyrosine protein phosphatase 86 239 IPR023485 -
Lele32g0326 251 SUPERFAMILY Phosphotyrosine protein phosphatases I 82 240 IPR036196 -
Lele32g0326 251 SMART LMWPc_2 84 241 IPR023485 -
Lele32g0326 251 Gene3D - 66 247 - -
Lele32g0326 251 Coils Coil 239 251 - -
Lele32g0326 251 CDD LMWPTP 85 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0326 Lele-ChrLele32 2021675 2023509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0326 21 245 Protein tyrosine phosphatase (PTP) family AT3G44620 56.538 2.97e-92 271