Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0305 ATGGAGGACAGTACGGTCACCCAGTCTTTGAACTCCACTCAGACCGAACAACACATGGCAAGTACGGCCGACATTAACGGACCCTCTTTTGATTTGGGAGCTGTTGGAGTCCAGAACTCTACCGTCGGAGGAAATTCCGAGGCTAGCGGTTCGGAGGTTGTGTTGAAGAGGGGAAGGGGAAGGCCTCGGAAGTACGATGGAAACCTTCCGTCTCCAAAATCGACGCCGTCGGGACTTTCAATTTCTCCATCTTCTAAGCGAGGCAGAGGAAGGCCACGTGGCTCTGGAAAGTTGCAGATGTTAGCTTCAATGGGTGACTATATACATATTTGTCTCTCTCCTTGTGGGATCTTTTCAGCCACAGCTGGAGGAAGCTTTATCCCTCATGTAGTCATTGTGAATCCTGGGGAGGATGTTGTGAATAGCATATCATCATTTTGTCATAAGGGCCCTCGAGCTCTTTGCATACTCTCTGCAATTGGTGCTGTATCTGTTGTCGACATTCAGCAACCTGGTTCTTCTGGTCGTTGTTGTTTGAGACATGAGGGTCTCTTTGAGATAATAACTTTATCTGGATCATATACCTTTGATGGCATCAGTGGTGGTACACACCAGAAAAGTCTCACCATGAGAATATCATTAGCTCAACCCGATGGGAGGATTTTCGGAGGTAATGTTGGGGGTTCACTGATAGCGGCTGGCCCTATTCAACTAATTCTGGGAAGTTTTAAGCAAAACATCAGTGGTGAAATTAAAAGGCGGCTGTCCCCTGGATCTTCTGATGCTGCCACTGACAGGCCTGGTGATTCAGATGCAGTGAGGCTTTCCTTACAAGTTCCTAAATTGATAGAATCTGAACTGAGCTTTCCTTCACCAACATCTGGACTTATGCCGGCATCTAATGGATTTCCTGATCATGTCATGCCTGGAACATCTAATGGATTAGCCAACAATGTCACTGCTACGACAACTAACGGTAATGGATTACCAGATTTCTTTTCTCCGAATCAGAACATGCACTCTACCTCGTTGAATGGTGCTAGCCTCGACTGTCAGGTGTTGCAGCCCTTCACAAATCCAATGACATTTGCAGATATTAATATTAATAATAATAACAATAGTGTCTCTCAGATGTGA 1137 0.4573 MEDSTVTQSLNSTQTEQHMASTADINGPSFDLGAVGVQNSTVGGNSEASGSEVVLKRGRGRPRKYDGNLPSPKSTPSGLSISPSSKRGRGRPRGSGKLQMLASMGDYIHICLSPCGIFSATAGGSFIPHVVIVNPGEDVVNSISSFCHKGPRALCILSAIGAVSVVDIQQPGSSGRCCLRHEGLFEIITLSGSYTFDGISGGTHQKSLTMRISLAQPDGRIFGGNVGGSLIAAGPIQLILGSFKQNISGEIKRRLSPGSSDAATDRPGDSDAVRLSLQVPKLIESELSFPSPTSGLMPASNGFPDHVMPGTSNGLANNVTATTTNGNGLPDFFSPNQNMHSTSLNGASLDCQVLQPFTNPMTFADININNNNNSVSQM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0305 378 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 244 IPR005175 -
Lele32g0305 378 MobiDBLite consensus disorder prediction 1 24 - -
Lele32g0305 378 CDD DUF296 128 243 IPR005175 -
Lele32g0305 378 SMART AT_hook_2 56 68 IPR017956 GO:0003677
Lele32g0305 378 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Lele32g0305 378 MobiDBLite consensus disorder prediction 70 84 - -
Lele32g0305 378 MobiDBLite consensus disorder prediction 33 48 - -
Lele32g0305 378 MobiDBLite consensus disorder prediction 1 96 - -
Lele32g0305 378 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 245 - -
Lele32g0305 378 ProSiteProfiles PPC domain profile profile. 123 268 IPR005175 -
Lele32g0305 378 Gene3D - 128 259 - -
Lele32g0305 378 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 299 IPR039605 GO:0003680
Lele32g0305 378 PRINTS AT-hook-like domain signature 56 66 IPR017956 GO:0003677
Lele32g0305 378 PRINTS AT-hook-like domain signature 84 95 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0305 Lele-ChrLele32 1904017 1906621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0305 55 254 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 46.569 2.39e-42 149