Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0289 ATGGAACTCTACAACCGGAGACTGCTTCTATTGAACGAAGAAGAGCCTTCCTCCTCCGACGACATCTCTTCACCACCGCGATTAACAGCCGCACCACTGTCGTCTTCACTGTTCGTAACACCTTTGAAACTATCAGCACCCGTACCCTTCAATTCTGACGTTGCTTACATCCTCATCATCATCCTGCTCTTAATAGCTTTCCTAGTTATGTTCATCCGAAGGTTCGCCGACCACTCCCCCGCATCCGAAGGTTCGCCACCGGCGTCTTCTAATTATCATTCTCCGTCATCCTCGTGCGGTGGTCTCGACCAAACCACAGTCCAATCCCTGCCGGTGTTTCGGTACAACGCGGAAGCAAAGCAGCCGGAGGACTGCGCCATTTGCCTCAGCGAATTCGAGATCGGTGAGACCGTTAAGATGGTTCCGAACTGTAAGCACATGTTCCACCGGGAGTGCATAGACACATGGCTATCCTCGCACGTGACGTGCCCGATTTGCCGTGGCAGCAAATTTTTTGCTGGGGAACGGCAGTCAGAATCGGTTAAGGTGGTGGAGCCGACCAGCGACAATCAGATTGTTAGACGTCAAGCGGTAGCATCAACGGTCGAGAATGGCACCACGTTGCCAGAAGGTAGAACGATGGGGACATCATGTAATCAGAGACGGAGCCGTAGTTGCTCAAACTTTAGAGATACGGTAGTTTTGCGAAGAACATTAAGCTACTGA 726 0.5152 MELYNRRLLLLNEEEPSSSDDISSPPRLTAAPLSSSLFVTPLKLSAPVPFNSDVAYILIIILLLIAFLVMFIRRFADHSPASEGSPPASSNYHSPSSSCGGLDQTTVQSLPVFRYNAEAKQPEDCAICLSEFEIGETVKMVPNCKHMFHRECIDTWLSSHVTCPICRGSKFFAGERQSESVKVVEPTSDNQIVRRQAVASTVENGTTLPEGRTMGTSCNQRRSRSCSNFRDTVVLRRTLSY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0289 241 FunFam E3 ubiquitin-protein ligase ATL6 91 171 - -
Lele32g0289 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 170 IPR013083 -
Lele32g0289 241 SMART ring_2 125 166 IPR001841 -
Lele32g0289 241 Pfam Ring finger domain 124 167 IPR001841 -
Lele32g0289 241 CDD RING-H2_PA-TM-RING 124 167 - -
Lele32g0289 241 SUPERFAMILY RING/U-box 106 172 - -
Lele32g0289 241 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Lele32g0289 241 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 43 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0289 Lele-ChrLele32 1806558 1807283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0289 56 175 C3H Transcription Factor Family AT2G27940 44.118 3.46e-33 118