Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0283 ATGGCCACAACGTGGACTATTAATGAGCAGGATACGACGGTTCACATGAACGGGTTTGGGGGGCACGACTTCATCGACGACGACCCAGACTATGATCAGTTGATCAATTTGATTCGGGCCAAGGCAGAAAGATCCGCGGATCATCAGGAAGACGATGATGACGGGGACGATTCTTCTGCGATCGGTGTTAATAATTCAAAACAGACGCCGAAAGCTGATGGGTCCGTCATTTTGATCTCGGAGAGGAGGAGGAGAGGACGAATGAAGCAAGCCCTGTACGCATTGCGTTCTTTGGTTCCCAACATAACCAAGACTCAACACAGGCCTGCAATCAAGGATCAGATGAAAGGCCCAGATGGCTACGTACATTCATTATTCTGCAAGAAGATCATGCAGATGGAGGTGATACAAGTGGAGGAAAGAGACTTTTATGTGAAAGTGGCGAGCAGCAAAGATGAAGGGGTGGCTTCCTCACTCTACGGGGCCCTGGAGTCTCTGTCAGGGTGCAGTGTTCACAGTTCACAGCTGGCCAAGCTCTGTGACTCATTTCAACATACGTTCACATTGAAAGTAAGCGAGATCTGTCCCACTCCTAAGTACATGACCCACAAAATACGAAATAATTTAAAATATTCTGACCTGGTCAGTGTTGAAAGATCCTGTAAAGAGAATGATAGATTTCCCTTGAACTGTGTCATGTTCTATTCCTGGGCTGAGTCCAGTACCTCAGGGCTTGATGGTCCCCTGCAGAGCTGCATTGGCCTTTTACATTCCCACTAA 780 0.4756 MATTWTINEQDTTVHMNGFGGHDFIDDDPDYDQLINLIRAKAERSADHQEDDDDGDDSSAIGVNNSKQTPKADGSVILISERRRRGRMKQALYALRSLVPNITKTQHRPAIKDQMKGPDGYVHSLFCKKIMQMEVIQVEERDFYVKVASSKDEGVASSLYGALESLSGCSVHSSQLAKLCDSFQHTFTLKVSEICPTPKYMTHKIRNNLKYSDLVSVERSCKENDRFPLNCVMFYSWAESSTSGLDGPLQSCIGLLHSH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0283 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 106 IPR036638 GO:0046983
Lele32g0283 259 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 47 105 - -
Lele32g0283 259 MobiDBLite consensus disorder prediction 59 73 - -
Lele32g0283 259 MobiDBLite consensus disorder prediction 43 75 - -
Lele32g0283 259 Gene3D - 65 116 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0283 Lele-ChrLele32 1766652 1768397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0283 23 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 39.171 1.95e-31 116