Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0270 ATGGGAAGAGCTCCTTGCTGTGACAAAGCAAATGTGAAGAAGGGGCCATGGTCGTCAGAAGAAGACACGAAGCTGAAAGAGTACATGGAGAAGAACGGGACAGGAGGTAATTGGATCGCTCTTCCTCACAAAGCAGGACTAAAAAGGTGTGGGAAAAGTTGCAGATTGAGGTGGCTCAACTATCTGAGGCCCAACATTAAGCATGGAGAATTCTCTGATGAGGAAGACAGAATAATATGCACCCTCTATGCTAATATAGGAAGCAGGTGGTCAATAATAGCAGCTCAGTTGCCAGGGAGGACAGACAATGATATCAAGAACTACTGGAACACCAAGCTGAAGAAGAAGCTAATGGGTTTGCTTCCTCCATCATCTAATCATCATGAGATCAGGAAACCTCCAACCTTATTTCAAACCTCTCATCATCAAAACCCTCCATTTGCTTCATACAGAGACTTTAGCTGTAATTACTACCCTGGCCCATCATCAACTATATCCTTCACCGGCCTTGAGTCCACTACTTCTGTTATTATGCCTTCAACTTATAACAACAACACAACTTCATCATCGTCAATTACCACCAATTTTCCTTATTTTCAAAACCAAGAGGCCTCCTTGGTTGGCGGGGGTCCAATGCAATACTACTACATGTTTGGAAGTGAAGGAAGTTGCAGCACTTCATCTGATGGAAGTTGCAGTCAAATCAGCTATGGAAGAGGAGACGCCAAACAAGCAGAAGAAATGGCTTTTCAATTCCATCACAACTACATGTCCAATGGTGGTGGGTTCGATAAGTTCATGCCCGGAGGTGAAAGTAGTATTAACCAGTGGACGACGACAGAGAAGCCAAGTGGGTACTTTGGGCAAATCCCATTAATGGATTATGGAATTGAGGAGATAAAGCAGATGGTCAGTGATAATAATAATAATAATGGGATGTATAGTAATAATATTGGGGAAAACAAGAGAGAGGAAGAGAAGGGGATGATGTACTACCACTACTGA 1005 0.4289 MGRAPCCDKANVKKGPWSSEEDTKLKEYMEKNGTGGNWIALPHKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICTLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPPSSNHHEIRKPPTLFQTSHHQNPPFASYRDFSCNYYPGPSSTISFTGLESTTSVIMPSTYNNNTTSSSSITTNFPYFQNQEASLVGGGPMQYYYMFGSEGSCSTSSDGSCSQISYGRGDAKQAEEMAFQFHHNYMSNGGGFDKFMPGGESSINQWTTTEKPSGYFGQIPLMDYGIEEIKQMVSDNNNNNGMYSNNIGENKREEEKGMMYYHY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0270 334 Gene3D - 70 143 - -
Lele32g0270 334 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele32g0270 334 FunFam Transcription factor RAX3 7 68 - -
Lele32g0270 334 CDD SANT 16 62 IPR001005 -
Lele32g0270 334 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele32g0270 334 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele32g0270 334 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele32g0270 334 Gene3D - 7 68 - -
Lele32g0270 334 FunFam Transcription factor MYB36 70 139 - -
Lele32g0270 334 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele32g0270 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele32g0270 334 CDD SANT 70 111 IPR001005 -
Lele32g0270 334 SMART sant 67 115 IPR001005 -
Lele32g0270 334 SMART sant 13 64 IPR001005 -
Lele32g0270 334 PANTHER OS09G0431300 PROTEIN 1 277 - -
Lele32g0270 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0270 Lele-ChrLele32 1682861 1684400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0270 1 119 MYB Transcription Factor Family AT5G57620 87.395 6.94e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele32g0270 Myb_DNA-binding 2.9e-12 CL0123