Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0268 ATGAGGGTCGTCATTATCATTAGCAACCACGCTCTTGTTTGGTGGTCTAGAACGATGCAGAGATCTGGTTATGGCCGTGATGGAATTTACAGGTCTCTCAGGCCCCCTCCCGTCACTCCCAGGGACGATAATCTCTCTCTCGTTTCGTTTCTCTTCAGAAATGTCGCCTCTTTTCCCACTAAACCTGCCTTGTTTGACGCCGATTCCTCCCAAACTCTATCCTTCGCTCAGTTAAAGTCCTTAGTAGTGAGAGTCTCCCATGGCCTTCTACATATGGGCATCAAGCAAAACGACGTCGTCCTCTTCTTTGCGCCCAACACCATCCTCTACCCTGTCTGCTTCCTCGGTGTCACCGCCGTTGGCGCCATCGCCTCCACTGCCAACCCTATCTACACGGTCGCGGAGGTTTCCAAGCAAGTGAAAGATTCCAATCCCAAGCTCCTGATTACCGTTCCTGAGCTGTGGGACAAAGTGAAGGGTTTCAATCTTCCCTCGGTGATTTTGGGTTCCCAAACCCCTTCACTTGTCTCGTCGAATTCGAAAATTACGACCTTCGATGGGTTGCTTGAGTTTGCCGGGTCTCCCACGGAATTTCCGGCAAGTAATGTCAAACAGAGCGATACGGCGGCGCTTTTGTATTCCTCGGGTACTACTGGGGTCAGTAAGGGAGTGATTCTCACGCATAAGAGTTTCATAGCCGCTTCTCTTATGATTGGCATGGATGACGAGTTGGCTAACGAGAGACACGATGTCTTTCTTTGCGTTCTCCCGATGTTTCATGTTTTCGGTCTGGCAGTCATTACATACTCGCAGCTTCAGAGAGGCAATGCGGTCGTGTCTATGAAGAAATTTGACTTCGAAATGATGTTAAGGGCAGTTGAAAAGTTTAGCGTGACTCGTTTGTGGGTTGTGCCTCCAATTATCCTTGCTCTGGCGAAACAGAGCGTGGTGAAGAAGTATAATCTTTCATCATTGAAGCAAATTGGATCTGGAGCTGCTCCTCTGGGGAAAGAATTGATGGAAGAGTGTGCTAAAAATTTCCCTCAAACTTTGGTTTTGCAGGGCTATGGTATGACAGAAACGTGCGGCATTGTATCTGTGGAGAATCCAAGAATGGGTATTCGTCATAGTGGTTCAGCAGGAATGCTTGTTTCAGGAGTTGAGGCTCAAATAATCAGTGTGGATACGCTGAAGCCCCTCCCTCCTCATCAGTTGGGTGAGATATGGGTACGGGGTCCTAATATGATGCAAGGTTATTACAACAATCCACAGGCCACCAGATCAACTATAGATAAAATGGGATGGGTGCATACGGGAGATCTTGGATATTTTGATGAGGAAGGGCAACTTTATGTTATTGACCGTATCAAAGAACTCATCAAGTATAAAGGTTTTCAGGTTGCACCAGCAGAACTCGAAGGACTTCTTGTTTCTCATCCTGAGATAACGGATGCTGTTGTCATCCCATATCCCGATGCTGAGGCTGGTGAGGTACCAGTTGCCTATGTTGTTCGTTCGCCCAATAGTTCACTGACTGAAGAAGACGTTCAGAAGTTTATTGCTGATCAGGTTGCACCTTTCAAAAGATTGCGAAGAGTGACATTCATCAACGCTGTTCCTAAGACAGTGTCTGGAAAAATTCTCAGAAGATTGCTTATTGAGAAAGCACGATCCAAAATATGA 1683 0.4682 MRVVIIISNHALVWWSRTMQRSGYGRDGIYRSLRPPPVTPRDDNLSLVSFLFRNVASFPTKPALFDADSSQTLSFAQLKSLVVRVSHGLLHMGIKQNDVVLFFAPNTILYPVCFLGVTAVGAIASTANPIYTVAEVSKQVKDSNPKLLITVPELWDKVKGFNLPSVILGSQTPSLVSSNSKITTFDGLLEFAGSPTEFPASNVKQSDTAALLYSSGTTGVSKGVILTHKSFIAASLMIGMDDELANERHDVFLCVLPMFHVFGLAVITYSQLQRGNAVVSMKKFDFEMMLRAVEKFSVTRLWVVPPIILALAKQSVVKKYNLSSLKQIGSGAAPLGKELMEECAKNFPQTLVLQGYGMTETCGIVSVENPRMGIRHSGSAGMLVSGVEAQIISVDTLKPLPPHQLGEIWVRGPNMMQGYYNNPQATRSTIDKMGWVHTGDLGYFDEEGQLYVIDRIKELIKYKGFQVAPAELEGLLVSHPEITDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVQKFIADQVAPFKRLRRVTFINAVPKTVSGKILRRLLIEKARSKI 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0268 560 SUPERFAMILY Acetyl-CoA synthetase-like 34 558 - -
Lele32g0268 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 555 - -
Lele32g0268 560 CDD 4CL 40 552 - -
Lele32g0268 560 FunFam Long-chain-fatty-acid--CoA ligase FadD 34 457 - -
Lele32g0268 560 Pfam AMP-binding enzyme 52 462 IPR000873 -
Lele32g0268 560 Gene3D - 458 559 IPR045851 -
Lele32g0268 560 FunFam 4-coumarate--CoA ligase 2 458 559 - -
Lele32g0268 560 Gene3D - 29 457 IPR042099 -
Lele32g0268 560 Pfam AMP-binding enzyme C-terminal domain 471 546 IPR025110 -
Lele32g0268 560 ProSitePatterns Putative AMP-binding domain signature. 211 222 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0268 Lele-ChrLele32 1666924 1671445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0268 19 560 Monolignol Biosynthesis Gene Families AT4G05160 69.118 0.0 805
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1139 11 18687622 18688546 Lele32g0268 32 1666924 1671445 CCT
Lele12g0183 12 1420046 1422254 Lele32g0268 32 1666924 1671445 CCT
Lele29g0289 29 1714101 1716818 Lele32g0268 32 1666924 1671445 hybridization
Lele30g1125 30 14275289 14278866 Lele32g0268 32 1666924 1671445 hybridization