Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0256 ATGAACGACATAAGCAGGAGGGTTGCTTTGGCTTTCATTGTTGCATTAAGCTGCTATTCGGAGCAAGTTTCATGTCAGAGCACCAATCAAAGCCAAGCTGCGGTTCAGCTCGTAGCCCAGGCCGTTTACGGAAGCATGTCTAGTTTCACGGGCGTCTTCAAGGATGAAATAAAAAAGAATCTGGGTTTCTGCATTGTTGATGTCGATGCTGATTGGGATGGGGCGTTTAATTTCACCAATGATCTGACATTTTTGACCTCATGTTCCCAATCTTTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAATTAAGTTATATGCCAGTGGTTTTGACATAAAGTCAAAGAGCCAATCTAACAACTTGCAGCCCAACAAGAACTGCAACTTGAGCGTCTGGCTTAATGGGTGTGAGCCTGGATGGGGCTGTATTGCGGCTGAGAAAGTTCAACTTAACAATACTAAGGACATCCCTGACAGGTCTACTGACTGTCAGCCTTGTTGTCCGGGTTTCTTTTGCCCACGCGGCATTACTTGCATGATACCTTGCCCCTTGGGTTCTTACTGTCCACGTGGACAGCTCAATCAAGCTACCGGAATATGTGAACCGTATCATTATCAGCTACCCGCTGGAAAGACAGGCCACAGTTGTGGGGGAGCAGATGTTTGGGCAGACATTTCAAGCAGTTGGGATGTTTTCTGTTCATCTGGATCTTACTGTCCGTCCTCCATCCAAAAAAATCCTTGCACTCAGGGACATTATTGCAGGACGGGTTCAACCCATCAAGAAAGTTGTTTCAAATTGGCGAGTTGTAAGCCTCAATCAGCTAATCAAAATATAACTGCATATGGTGTCATGGTTTTTGCTGGTTTGAGCTTCTTGCTTATCATCATATATAATTGTTCTGACCAAGTTCTTGCAACTCGGGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCAGCTAAAGACATTGCTAAGAAACACGCAGTAGGACTGCAAAGTTCTTTATCACGTACGTTTTCTCGTAGAAAATCTATGAAGGGAGATCTGAAAGCTTTTGGTTCTAAATCTGAATCAGAAACTCCCTTTCCACCTGCGCCACCAGCAGATGCTGGTACATCATCTGCAGCATCAAAAGGAAAAAAGGATAAAACTAGCCTCACAAAAATGATCCAGAACATTGAGGAAGACCCTGATAGTCAGGAAGGCTTTCATGTTGAGATAGGAGATAAAAATATCAAAAAACAAGCACCAAAAGGCAAGCAATTGCATACGCAAAGCCAAATTTTTAAGTATGCGTATGGTCAAATTGAAAAAGAAAAGGCTATGCAGGAACAAAACAAGAACCTGACCTTCTCTGGAGTTATCTCAATGGCTAGTGATATTGAGATCAGGAAGAGGCCTACAATTCAGGTTGCTTTCAAAGATTTAACTCTCACTTTGAATGCCAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTAAATCCTGGTCGAGTTTCAGCAGTCATGGGCCCATCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCATACGACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATCCGGTCATACAAGAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTAGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGACTTTCAGCTGATCTACCGAAAGCAGAGAAGGTTCTAGTAGTTGAAAGAGTTATTGAGTCGTTAGGTCTGCAAGCAATCCGAGATTCTCTGGTTGGAACAGTGGAGAGGCGTGGAATCTCTGGAGGTCAAAGAAAACGAGTGAATGTAGGACTGGAAATGGTTATGGAACCTTCACTCCTGATTTTAGATGAACCAACATCTGGTTTAGATAGTTCATCTTCTCAGTTATTGCTTAGAGCACTTAGACGAGAGGCTCTAGAGGGTGTAAATATATGCATGGTCCTTCACCAACCAAGTTACACACTGTTCAGGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTATAGTGTATCTTGGACCAGTGAAGAAAGTTGAAGAGTACTTTTCCAGCTTGGGAATTGTTGTTCCTGATCGTGTTAATCCTCCAGATTATTACATTGACATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATCCTGTTCCTCTGGACCTGCTTCAGGGTGTTGAAGGAATGGAAGGCGCAAGTAGTGAAAGTTCCACCCATGGGGCAGCCACTCCAGTAGCAGAAACTGAAGATCCGTCTTTAGCTGGGGAACTTTGGCAGGATGTAAAAGTCCACGTTGAGAAGAAGAAAGACTACCTTCGATCTACTTTCTTTACATCAAATGATTTATCAAATCGCGTAACCCCTGGAGTCTTCCAACAATACAGATACTTTCTTGGAAGGTCTGGTAAACAGCGGCTACGAGAAGCTAGAACACAGGCTGTAGATTTTCTAATTTTGTTACTAGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAAACGTTTGGGGCAAATGGTTACACATATACTGTTATAGCAGTATCACTCCTATGCAAGATCGCAGCTCTGAGAACATTTTCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACAGTTGATCATTTTAATACACTCATAAAACCTGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAATCCGAGATCCTCTGTTGTAGATAACTACTTTGTTTTGGTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCTCACTTGAGCCTGGTCCTGCCCAATTGTGGTCGGTGTTACTTCCAGTAGTTTTGACGCTTATAGCAACCAGTGATAGTGTAGCTGAGAGCTCATTCATGAGCAAGGTAGCTGACGTTTGCTATGCAAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGGGTTTGGTTAATAACCCGATGTGGTGCACTAAATGTCCGTGGCTATGATCTCAACAACTGGTATCAATGTCTTGTTCTTCTTGTGGTAACCGGAGTGCTTAGTCGCATTGTGGCATTCTTTTGTATGATGACTCTCCAGAAGAAATAA 3297 0.4243 MNDISRRVALAFIVALSCYSEQVSCQSTNQSQAAVQLVAQAVYGSMSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQSLKGDISQRICTAAEIKLYASGFDIKSKSQSNNLQPNKNCNLSVWLNGCEPGWGCIAAEKVQLNNTKDIPDRSTDCQPCCPGFFCPRGITCMIPCPLGSYCPRGQLNQATGICEPYHYQLPAGKTGHSCGGADVWADISSSWDVFCSSGSYCPSSIQKNPCTQGHYCRTGSTHQESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQSSLSRTFSRRKSMKGDLKAFGSKSESETPFPPAPPADAGTSSAASKGKKDKTSLTKMIQNIEEDPDSQEGFHVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKAMQEQNKNLTFSGVISMASDIEIRKRPTIQVAFKDLTLTLNAKNKHLLRCVTGELNPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLIVYLGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDLLQGVEGMEGASSESSTHGAATPVAETEDPSLAGELWQDVKVHVEKKKDYLRSTFFTSNDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDETFGANGYTYTVIAVSLLCKIAALRTFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLVCLVYCVTGIAYILAISLEPGPAQLWSVLLPVVLTLIATSDSVAESSFMSKVADVCYAKWALEAFVISNAKRYAGVWLITRCGALNVRGYDLNNWYQCLVLLVVTGVLSRIVAFFCMMTLQKK 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0256 1098 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 489 731 IPR003439 GO:0005524
Lele32g0256 1098 FunFam ABC transporter G family member 24 483 725 - -
Lele32g0256 1098 Gene3D - 478 726 IPR027417 -
Lele32g0256 1098 CDD ABCG_EPDR 487 713 - -
Lele32g0256 1098 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lele32g0256 1098 MobiDBLite consensus disorder prediction 319 340 - -
Lele32g0256 1098 ProSitePatterns ABC transporters family signature. 630 644 IPR017871 GO:0005524|GO:0016887
Lele32g0256 1098 SMART AAA_5 515 716 IPR003593 -
Lele32g0256 1098 MobiDBLite consensus disorder prediction 352 403 - -
Lele32g0256 1098 Pfam ABC-2 type transporter 687 1098 IPR043926 GO:0140359
Lele32g0256 1098 Pfam ABC transporter 509 658 IPR003439 GO:0005524
Lele32g0256 1098 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 238 1086 - -
Lele32g0256 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 727 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0256 Lele-ChrLele32 1588735 1594504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0256 516 719 Calmodulin-binding Proteins AT2G36910 27.803 1.25e-10 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0272 29 1610927 1616641 Lele32g0256 32 1588735 1594504 hybridization
Lele30g1142 30 14370301 14376052 Lele32g0256 32 1588735 1594504 hybridization