Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0251 ATGATGTTTTCTCGGTCGACTTCCAATTACTCTATGGGCCACCCCCATCATCAGTTGCCGAGTCCTAGTGGTTTACCAAAACCCACTAATTTACACAAACTGGATGACATATATATCCCTGACTTTTTCTTGAGAGCAGGAAAACTCCTATATATCTCCAACACAACCATACAGAAGATAAAAGAGTTGGAATCAATGGAGAAAGCTGCTGCCACTCGACTCTTGATTTGCAGTTTATTCGCTGTACTTTGTTTGCTCTCTTGCCCAGCAACTTGTTCCGAAGTCGAGGATGAAAGTGAGTTTAGTTACGACGAAGATTCAGACACAGGACCATCTCGATGGGGAGATATCAAACCAGAATGGATACTGTGCAAAACTGGAAGAATGCAATCCCCCATTGATTTGATCAATAAAAGGGTTCAAGTTGTCTCACATTTAGGGCCCCTCCAGCAGAAGTATCACCCTTCCAATGCCACTCTTAAAAATAGAGGCCATGATATCAAGTTGGAATGGGATGCAGGCGCAGGCTATTTTCAAATCAACAAAACTCGGTATTTTCTGATACAATGCCACTGGCATTCTTTCTCAGAACATACCATCGATGGCAAAAGATTTGATCTAGAGTTACATATGGTGCACCAAACGGAAAAAGGAGAAATAGCCGTAATTGGGATACTGTACAAATTTGGTAAACCAGATCCTTTCTTGTCATCGTTGATGGATGAGTTGAGGGCCATATCTGATACTCCTGAAGCAGAAGAAAACGCGGGAATAGTTGATCCATGGCTGATTAAACCAAGTAGCAAGAGGTATTACAGATACATGGGTTCTCTCACCACACCTGATTGTGCTGAAAACGTTGTTTGGACCATCCTCTATGATGAGCACGTGAGAACTGTTTCAAAACGGCAAGTCGAGATGCTTCGAGATGCTGTTAATGACGATGCGGAGAATAACGCTAGACCACTGCAGCCAATAAACAACCGCTTGGTGCAATTCTATCAACCGAAGGGTTCTAAAAATGACTGA 1029 0.4266 MMFSRSTSNYSMGHPHHQLPSPSGLPKPTNLHKLDDIYIPDFFLRAGKLLYISNTTIQKIKELESMEKAAATRLLICSLFAVLCLLSCPATCSEVEDESEFSYDEDSDTGPSRWGDIKPEWILCKTGRMQSPIDLINKRVQVVSHLGPLQQKYHPSNATLKNRGHDIKLEWDAGAGYFQINKTRYFLIQCHWHSFSEHTIDGKRFDLELHMVHQTEKGEIAVIGILYKFGKPDPFLSSLMDELRAISDTPEAEENAGIVDPWLIKPSSKRYYRYMGSLTTPDCAENVVWTILYDEHVRTVSKRQVEMLRDAVNDDAENNARPLQPINNRLVQFYQPKGSKND 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0251 342 SUPERFAMILY Carbonic anhydrase 100 331 IPR036398 -
Lele32g0251 342 Gene3D Alpha carbonic anhydrase 97 341 IPR036398 -
Lele32g0251 342 MobiDBLite consensus disorder prediction 1 16 - -
Lele32g0251 342 CDD alpha_CA_prokaryotic_like 110 333 IPR041891 -
Lele32g0251 342 PANTHER CARBONIC ANHYDRASE 98 329 IPR023561 GO:0004089|GO:0008270
Lele32g0251 342 MobiDBLite consensus disorder prediction 1 25 - -
Lele32g0251 342 ProSitePatterns Alpha-carbonic anhydrases signature. 196 212 IPR018338 GO:0004089|GO:0008270
Lele32g0251 342 FunFam Alpha carbonic anhydrase 3 98 338 - -
Lele32g0251 342 ProSiteProfiles Alpha-carbonic anhydrases profile. 99 335 IPR001148 -
Lele32g0251 342 Pfam Eukaryotic-type carbonic anhydrase 110 333 IPR001148 -
Lele32g0251 342 SMART Carb_anhydrase_2a 103 333 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0251 Lele-ChrLele32 1549320 1554754 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0266 29 1568430 1570732 Lele32g0251 32 1549320 1554754 hybridization
Lele30g1147 30 14414315 14417050 Lele32g0251 32 1549320 1554754 hybridization