Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0248 ATGGATGCTCGTGCTTACCGGGCTATGATGAAGAAAAAACCAAAGATAGATTGTCCTGAGGAGACAAATGGTAAAGAGAATTTAATTCAAGAAGGTGGCAACAATGTTGAGGACAAGATTGATGAGCACTTCAAAGGGAGTAATTTAGATTCTGAAGAAGTTTCCAACAACGGAATGCTACCATCTGATGATGCCAAGGAGTTAGTAAACCTTTCTGATGTTGAGGATAGAGGTGAAACTGAAGCCACGGTCGCCGCAGAAATTTCTGAGAAAGGTGTTGACTGTGCACCTTCAAATGATGTCTCTACAGAGGTCCCAGCGGATGATGGAAAAATATGTCTCATTTGCAAACGCGGTGGGCAGCTCTTATTCTGCGATGGAAAAGAATGTGGTGGATGCTACCATTTTTCTTGTCTTGAACCTCCCATGGTGGATGCTCCCCTTGGAGTTTGGCACTGTCACCTCTGCTTGAAGAAGAAGATAGAGTTAGGTGTATATTCTGTATCTGAGGGAGTAGAATCAATTTGGGATGCCAGAGAAGTCAAGGTGTCTCATGCTGATGGATGGACAACTGAGAAACGTTTTCTTGTGAAGTATAAAGGCCTTGCGCATGTTCACAACCGTTGGGTCCCAGAAAGTCAGTTACTTCTAGAAGCTCCTCCATCACTGCTTGAGAAATTTAATCAGAAAGATCAGGCCTTAAAGTGGAAGCAAGAATGGAGGTTACCTCATTGCTTGCTTCAGAAGAGAGCATTAATCTTTGCCCAGCAGGATGGTGATCCCTGGAATGGCCAAGCTGTTGGTAATTCTGTCTGTCACTATGAATGGCTTGTTAAATGGCAGGGTCTTGGTTATGAACATGCATCATGGGAGCTGGGAAATGCTTCGTTTCTTCGTTCGCTTGAAGGTCAGAGGCTAATTAAAGACTATGAAGATTGTCATCAGAGGTTGAAGAGAGTTCCTTTATCATCCAAAGTAGATAAGGTTTTTGATGGTTCAGGAAATAAGCCTGTCCTTGAGAATGAAGAGGTACTGAGAAAACGTGCAAAGGTATTTGATGCTGATCAGCCTTGTTCTAAGCGTGAAGGTGAAAAATTATCTGCTGGAAACAACGAAGAAAGACCTCAAGGCAATGATGTTGAATTCTTGAAAGCAAGGAAATCGCGTGATGAGCAAAGGAGCTCACATCTCTCTCTGAAGTCAGAAATAGCTAAGCTTTGTGAAATCCTTCATGTCCCAATATGGAATTCTGAAGTGAGTAAATTGATGTTAGATGAACGTAGGCTTGACCTTGTTGCTATTAAACTAAGATTCAAGATCATGAAACCTAAGGATAATGTCAAGAGGATGGCTGATGAATTTCTTGAGTATGTCATGAACAACCATCGTGTGGATAGTAGTACTCTTCCAAAGTCAATATTGGAGGCTTTTCAAATTTCTCTGTGTTGGATTGCAGCTTCTTTGGTAAAGCACAAGATTGACCATGAAGCTTCCCTTATACTTGCAAAACAGCATTTAAAATTTGATTGTTGGAAGGATGTGGCAAACGTAATTTATTCAATGTTGTGGTGTTTGAAGAACATATTTTTGCATCGAACAGGAAATTACAATGTCACTGACTCTCCAAAAGCTTCTCCATCTGAATTATCTGGTAAGAATTATTCTTGTACGGGCTTAGGACTGGAGGTTGAATTAGCTAAGAAAGATGTCTTCGAAAGCATTAAAGAAATTCGAAAGAAGTGCCAAAAGACGCTGAGGAAGTTACTTCTTAAGCATCAAGAAGAAAAGAACAAGCTGGATGCAACATACGAGGAAAAAAAGGCCCATCTTGAGAGAGAATACAAAATAGAATCAGCCGTTATTCGGTACTGTGCTCCCAATGATGTGATGAGATCAGAAAAGCTTAAGGATTTAGATATCGAATATACAGGAAGAATTGAAGATTTGAAGCATCAGCATGAAATGCATCTCAAAGATCTTGAGAATGTCCAATCGATGGCAAGGAAAATGTTACAAAATAAGGAGGCCAGTTGGGTGGAAGATGTGAAGTCTTGGGCACAAGATCAATTGCTAACCACACTTCCTTCGAAAGAACATGGGAATGGGATAGAATACTTGAAGACTAAACATAATGTCAACGGAGCCATATGCATGATTAACGAAGGGGAAGGGCATGATATTTTTAATGATGGTTGTAGGGAGAAAACTGTGTCTGATGGTTTACAGAAGGATATAACTGTGGATCCTCCTTCATCCAGGGAACTAATTTCTGATGGAAGTCCATTGAATGTTTCAGATAGAGAGTTGTCATCAAGACACTGTGAAAGTCCACTTTTGCCAGATCAGCAAACTTCTGATGGAGTCTCATTACACATGCACGATGGGCAGGTTTCAATTGAAGTGCCTGAACCTAGTCGGGGAATAGTTGAATGCCATAATGGCAGAGAGCACCAAACAGATGTGGTATTGTTGGATCAAACTGCCACATCAGAGGAGCAGAAACAAATGTCGAGAACCATGAACAATAACACTTTGTCCCAGATGGCAATAGCACTATGTTATGCAGCAACTTCCATCTGCAGAGTCCCCTAA 2592 0.4101 MDARAYRAMMKKKPKIDCPEETNGKENLIQEGGNNVEDKIDEHFKGSNLDSEEVSNNGMLPSDDAKELVNLSDVEDRGETEATVAAEISEKGVDCAPSNDVSTEVPADDGKICLICKRGGQLLFCDGKECGGCYHFSCLEPPMVDAPLGVWHCHLCLKKKIELGVYSVSEGVESIWDAREVKVSHADGWTTEKRFLVKYKGLAHVHNRWVPESQLLLEAPPSLLEKFNQKDQALKWKQEWRLPHCLLQKRALIFAQQDGDPWNGQAVGNSVCHYEWLVKWQGLGYEHASWELGNASFLRSLEGQRLIKDYEDCHQRLKRVPLSSKVDKVFDGSGNKPVLENEEVLRKRAKVFDADQPCSKREGEKLSAGNNEERPQGNDVEFLKARKSRDEQRSSHLSLKSEIAKLCEILHVPIWNSEVSKLMLDERRLDLVAIKLRFKIMKPKDNVKRMADEFLEYVMNNHRVDSSTLPKSILEAFQISLCWIAASLVKHKIDHEASLILAKQHLKFDCWKDVANVIYSMLWCLKNIFLHRTGNYNVTDSPKASPSELSGKNYSCTGLGLEVELAKKDVFESIKEIRKKCQKTLRKLLLKHQEEKNKLDATYEEKKAHLEREYKIESAVIRYCAPNDVMRSEKLKDLDIEYTGRIEDLKHQHEMHLKDLENVQSMARKMLQNKEASWVEDVKSWAQDQLLTTLPSKEHGNGIEYLKTKHNVNGAICMINEGEGHDIFNDGCREKTVSDGLQKDITVDPPSSRELISDGSPLNVSDRELSSRHCESPLLPDQQTSDGVSLHMHDGQVSIEVPEPSRGIVECHNGREHQTDVVLLDQTATSEEQKQMSRTMNNNTLSQMAIALCYAATSICRVP 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0248 863 MobiDBLite consensus disorder prediction 1 35 - -
Lele32g0248 863 SMART PHD_3 112 157 IPR001965 -
Lele32g0248 863 Gene3D - 171 234 - -
Lele32g0248 863 MobiDBLite consensus disorder prediction 742 767 - -
Lele32g0248 863 SUPERFAMILY Chromo domain-like 129 233 IPR016197 -
Lele32g0248 863 Coils Coil 578 609 - -
Lele32g0248 863 MobiDBLite consensus disorder prediction 355 369 - -
Lele32g0248 863 ProSiteProfiles Chromo and chromo shadow domain profile. 170 239 IPR000953 -
Lele32g0248 863 ProSiteProfiles Zinc finger PHD-type profile. 110 159 IPR019787 -
Lele32g0248 863 MobiDBLite consensus disorder prediction 1 24 - -
Lele32g0248 863 Gene3D - 253 312 - -
Lele32g0248 863 SUPERFAMILY FYVE/PHD zinc finger 107 160 IPR011011 -
Lele32g0248 863 SUPERFAMILY Chromo domain-like 273 312 IPR016197 -
Lele32g0248 863 MobiDBLite consensus disorder prediction 355 380 - -
Lele32g0248 863 ProSitePatterns Zinc finger PHD-type signature. 113 156 IPR019786 -
Lele32g0248 863 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 164 IPR013083 -
Lele32g0248 863 Coils Coil 646 666 - -
Lele32g0248 863 PANTHER HELICASE PROTEIN MOM1 1 413 IPR039322 GO:0031507
Lele32g0248 863 SMART chromo_7 169 232 IPR000953 -
Lele32g0248 863 SMART chromo_7 264 315 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0248 Lele-ChrLele32 1531818 1541345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0248 111 280 Core DNA Replication Machinery Family AT4G14700 26.554 3.87e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0264 29 1545503 1561169 Lele32g0248 32 1531818 1541345 hybridization
Lele30g1150 30 14423346 14434540 Lele32g0248 32 1531818 1541345 hybridization