Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0246 ATGTTGGGGCGCGGCAGCGATCACGGCGTTGTTTTAATGGCGGAAAACGACGAGAGGACGAAGGGGAATAAGGCAGACCCGTTGAAGTGGGGGGAAGCGGCGGAGTTGATCAGGGGGAGCCACGTGGAGGAAGTGAAGGCCATGGTGAGAGATTACAGGAGGAAGGTGGTGAGGGTGGGAGGGGAGTCGGTGACGGTGGGGCAGGTAGCGGCGGTGGCGGAGGCGAGGCCGAGGGTGGAGCTGGAAGAGAGGAAGAGGGAGGGAGTGGAGGCGAGCAGCGCGTGGGTGATTGAGAGCGTGAAGAAAGGGATGGACAGTTATGGAGTGACGACGGGGTTCGGTGCCACGTCGCACCGGAGAACCGGCCGAGGGGTGGCGCTGCAAGCTGAGCTCATAAGGTTTTTGAATGCGGGAATATTTGGGAATGGAACAGAAGCTTGCAATACCCTGCCGGCGAGTGCATCAAGAGCGGCAATGTTGGTCAGAATCAACACCCTCCTCCAAGGTTACTCCGGCATCAGATATAACATACTTGAAGCCATTGCAAAACTCCTCAACCACAGCATTACTCCATGCTTGCCCTTGCGCGGTTCCATTTCAGCCTCCGGGGACTTAGTCCCATTTTCATACCTTGCCGGACTGTTGATCGGAAGGCCAAATTCAAAAGCCATTGGCCCCAACGGCGAGTCCCTAAGTCCGTCAGAAGCCTTCCGTCTAGCTTCTATCCACGAGGGTTTCTTTGAGTTGCAGCCAAAGGAGGGCCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCCATGGTTCTTTTTGAGGCCAACATTTTAACCGTTCTTTCTGAAGTCATGTCCGCCATTTTCGCTGAAGTAATGCACGGGAAACCAGAGTTTACAGACCATCTGACACACAGATTAAAACATCATCCTGGGCAGATAGAAGCAGCAGCAATAATGGAACACATCTTAGATGGAAGTGCTTATGTTAAAGCAGCGAAAAAGTTGCACGACATCGATCCATTTCAAAAGCCTAAGCAAGATAGGTATGCTCTTAGAACTTCACCTCAATGGCTAGGGCCTCAGATTGAAGTTATCAGATCATCAACAAAATCCATTGAGAGGGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTATCGAGGAACAAAGCTCTTCATGGTGGCAATTTTCAGGGCACACCAGTTGGTGTTTCCATGGACAACACAAGACTAGCTTTGGCTGCCATTGGGAAGCTCCTTTTTGCTCAAATGTCTGAGCTGGTTAATGATTTTTACAACAATGGCTTGCCTTCAAATCTTTCTGGGGGACGTTTTCCAGGCTTGGATTATGGATTCAAGGGTGGCGAAATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTACCTGGGAAACCCAGTCACTAATCACGTCCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGATTAATCTCTGCAAGGAAAACAGCTGAAGCAGTTGAGATATTGAAGCTAATGACTTCAACTTACTTGATTGCTCTCTGTCAAGCCATAGATTTGAGGCATTTGGAGGAGAACTTGAAGAACACGGTTAAGAATACAGTGAGCCAAGTGGCTAAGAAGGTCCTAACCGTGGGTGCTAATGGAGAGCTTCGTCCTTCAAGATTCTGTGAGAAAGATTTGCTCAAGGTGGTTGATCGGGAACATGTTTTTGGCTATATTGACGATCCGTGCAACGCTACTTACCCTCTGATGGAAAAGCTAAGGCGTGTGCTTGTGGAACATACGTTGATGATGATGAGTAATGGTGGTTTGGAAAGTGGATATGCTTCAATATTCCTCAAGATCGTTGCCTTTGAAGAGGAACTGAAAGCAGTGTTGCCCAATGAAATTGAATCTGCAAGAAATGCCTTTGAGAAGGGCATTTCAGCAATCCCTAACAAGATTAAAGATTGCAGGTCGTATCCACTTTACAAGATTGTAAGGGAGGAGTTGTGCACAGAGTTTCTAACCGGAGAAAAAAGTCGGTCCCCAGGAGAAGATTTTGATAAAGTTTTCACTGCAATTAGTGAAGGGAAGTTGATTGATCCCATGTTTGAATGCTTAAAGGATTGGGATGGTGCACCTCTTCCAATCTGTTAA 2154 0.4777 MLGRGSDHGVVLMAENDERTKGNKADPLKWGEAAELIRGSHVEEVKAMVRDYRRKVVRVGGESVTVGQVAAVAEARPRVELEERKREGVEASSAWVIESVKKGMDSYGVTTGFGATSHRRTGRGVALQAELIRFLNAGIFGNGTEACNTLPASASRAAMLVRINTLLQGYSGIRYNILEAIAKLLNHSITPCLPLRGSISASGDLVPFSYLAGLLIGRPNSKAIGPNGESLSPSEAFRLASIHEGFFELQPKEGLALVNGTGVGAGLASMVLFEANILTVLSEVMSAIFAEVMHGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHDIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRFPGLDYGFKGGEIAMASYCSELQYLGNPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMTSTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTVGANGELRPSRFCEKDLLKVVDREHVFGYIDDPCNATYPLMEKLRRVLVEHTLMMMSNGGLESGYASIFLKIVAFEEELKAVLPNEIESARNAFEKGISAIPNKIKDCRSYPLYKIVREELCTEFLTGEKSRSPGEDFDKVFTAISEGKLIDPMFECLKDWDGAPLPIC 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0246 717 FunFam Phenylalanine ammonia-lyase 262 557 - -
Lele32g0246 717 CDD PAL-HAL 62 525 IPR001106 -
Lele32g0246 717 SUPERFAMILY L-aspartase-like 26 717 IPR008948 GO:0003824
Lele32g0246 717 Gene3D - 17 261 IPR024083 -
Lele32g0246 717 Gene3D Fumarase/aspartase (Central domain) 263 711 - -
Lele32g0246 717 Pfam Aromatic amino acid lyase 65 538 IPR001106 -
Lele32g0246 717 Gene3D - 528 651 IPR023144 -
Lele32g0246 717 FunFam Phenylalanine ammonia-lyase 528 651 - -
Lele32g0246 717 PANTHER HISTIDINE AMMONIA-LYASE 22 717 IPR001106 -
Lele32g0246 717 FunFam Phenylalanine ammonia-lyase 17 261 - -
Lele32g0246 717 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 26 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0246 Lele-ChrLele32 1524854 1527138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0246 25 717 Monolignol Biosynthesis Gene Families AT3G53260 75.862 0.0 1120