Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0244 ATGCTCGTTATCTTGTTTATGCAGATCAACTATCTGATACTTCTGGCCATAGCAAGTGGGAATGTAGATGTTCTTTCCAAGGGAACCAGGACTCCATTGCCAATTGTTCTGCGTCCTGTGATTGTCGTTCAGATGCGAAAGAGAGTGGATCTATATGGACGTGCATATGTGATCCCAACGGGTTTCCTAAAGTGGCAGCAGATGGCCATAGTCCTAATTGCTTTACAGCCTGCAACTGCACCTGGGGATCTCTCTCCATGTCACAAGGACCGGTGTCCTGTTCAACCGCCAATATTCTCATCAGATAAGGAAACAAGTTGCAATAGTACCACCAACTTAATTAGTAACAGGACTTCATCAGTGCTAGAAACAAAATTTGCCATAAATTCTCCCATTAATAATATTACAGGGTGCTTTAAGAAGGCCTCTTTCTTGTTTGGGAGCAGAACAGAGACTTTTCAAGGCAAAATTATTCAATTTTCATTTGCTGAATTGGAAAATGCAACTGAAAACTTTTCAGCTTCCAATCTTATTGGACTAGGGGGAAGTAGCTATGTATATCGTGGTCAGTTGAAAGATGGTAGTAATGTGGCAATTAAGCGACTAAAATCTCCAGGAGGTCCTGAAGCCGACTCTGTATTTTTGACAGAGATTGAGCTATTATCTAGACTCCATCATTGCCATCTTGTGCCTTTACTTGGATACTGTTCAGAACTTAAAGGGAAACATGTTGAAAGGCTGCTAGTATTTGAGTACATGGCCAATGGAAATTTGAGGGACTGTTTGGATGGAGTTTCTGGAGAAATTATGGATTGGACTACTCGGATTACAATTGCAATGGGAACTGCAAGAGGCTTGGAATATCTCCATGAGGCAGCAGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACTAATATTCTTCTGGATGAAAATTGGAAGGCAAAAATAACTGACCTCGGTATGGCTAAAAACTTGAGAGTTGATGAACCCCCAAGCTGTTCAAATTCCCCAGCAAGAATGCAGGGGACGTTTGGCTATTTTGCACCTGAGTATGCAATATTTGGAAGAGCCTCTCCTAAGTCTGATGTCTTCAGTTTTGGTGTGGTTCTTCTTGAGCTCATGAGTGGTCGGCAACCTATCCATAAATCCACAGGCAAACAAGAGAGCCTCGTCATATGGGCTACACCTCGCTTGCAAGATAGCAAGCGAGTAATAACCGAGGTGGCCGACCCTCATTTGAATGGGAACTTTCCTGAAGAAGAAGTGCAGATAATGGCATATTTAGTAAAGGAGTGTTTGCTGCTGGATCCTGATGCTAGGCCTACCATGAGTGAAGTTGTTCAAATTCTTTCAACAATATCACCTGATAAATCTAGGAGGAGAATCCACATTCCAGTCAGCCTTTTTCAGGAACCTCAAGATTCATTGCCATTAGGTATTAACCACAATATGATTGTTGGGAACAAAAATGAAGTAGAAACAGTTTCATCTGAGAAGAAAAGCATAGGAGATTCCGATTCTGCTTTATTTGGAGAGGAATCGGACGAGATGCTCATACAAGCTCACAAAAGTCCGGTGGTGAGCACAAAGGAAAAGCCATTAAAAAAGAATTTCATAGCAAATATTGGCAGGAGCAAAGATGGCACTGAAAATTGCAAAAATGGTTCAAGGACACAATTTTGGTTTCCGTATGCTGCAACGACTTCGACGACCTACTCGCCGTCTCCGACCACCCAGAAAACCAAGGCTCCTATTTTCAATGAAGATTGGGTCCGACCCGATGGCCGTGGCTTCCACCAGTGCAGGCCCGCCTTTTTCAGAACTGGTGCTGTGAATTCTGCCTCTGGATCTGCTTATGCAGAGTTTGGAAACACCAAGGTCATTGTATCTGTGTTTGGGCCAAGGGAGAGTAAGAAGGCCATGATGTACAGCGACATAGGGCGTCTAAATTGCAATGTAAGCTTTACTACATTTTCAACTCCAGTTCGCGGCCAGGGATTGGACAACAAAGAATACACTACAATGCTTCACAAGGCTTTGGAGGGTTCAATAATGTTGGAAACTTTTCCGAAGACCACTGTGGATGTTTTTGCATTGGTACTGGAATCTGGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTAGCAGATGCAGGAATAATGATGTTTGACCTTATTGCCTCAGTTTCTGTGTCTTGTCTCGGTAAGAACCTTGTTATTGATCCTATTTCGGAGGAGGAAAGCTGTCAAGATGGAAGCTTAATGATAACTTGCATGCCTTCTCATTATGAAATCACCCAGCTCACTGTTACTGGGGATTGGTCTACCCCAAAGATTAACGAGGGAATGCAGCTATGTTTAGATGCTTGTGCAAAACTTGCAAAGATCATGAGGTCATGTCTGAAAGAAGCTGCTCAAGGTTCACAAGAATAG 2448 0.4301 MLVILFMQINYLILLAIASGNVDVLSKGTRTPLPIVLRPVIVVQMRKRVDLYGRAYVIPTGFLKWQQMAIVLIALQPATAPGDLSPCHKDRCPVQPPIFSSDKETSCNSTTNLISNRTSSVLETKFAINSPINNITGCFKKASFLFGSRTETFQGKIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKDGSNVAIKRLKSPGGPEADSVFLTEIELLSRLHHCHLVPLLGYCSELKGKHVERLLVFEYMANGNLRDCLDGVSGEIMDWTTRITIAMGTARGLEYLHEAAAPRILHRDVKSTNILLDENWKAKITDLGMAKNLRVDEPPSCSNSPARMQGTFGYFAPEYAIFGRASPKSDVFSFGVVLLELMSGRQPIHKSTGKQESLVIWATPRLQDSKRVITEVADPHLNGNFPEEEVQIMAYLVKECLLLDPDARPTMSEVVQILSTISPDKSRRRIHIPVSLFQEPQDSLPLGINHNMIVGNKNEVETVSSEKKSIGDSDSALFGEESDEMLIQAHKSPVVSTKEKPLKKNFIANIGRSKDGTENCKNGSRTQFWFPYAATTSTTYSPSPTTQKTKAPIFNEDWVRPDGRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFSTPVRGQGLDNKEYTTMLHKALEGSIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMFDLIASVSVSCLGKNLVIDPISEEESCQDGSLMITCMPSHYEITQLTVTGDWSTPKINEGMQLCLDACAKLAKIMRSCLKEAAQGSQE 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0244 815 Gene3D Transferase(Phosphotransferase) domain 1 253 466 - -
Lele32g0244 815 FunFam Exosome complex component RRP41-like 572 811 - -
Lele32g0244 815 PANTHER OS01G0750732 PROTEIN 108 490 - -
Lele32g0244 815 FunFam receptor-like serine/threonine-protein kinase NCRK 253 463 - -
Lele32g0244 815 SMART serkin_6 172 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0244 815 Pfam 3' exoribonuclease family, domain 2 729 789 IPR015847 -
Lele32g0244 815 Gene3D - 579 814 IPR027408 -
Lele32g0244 815 SUPERFAMILY Ribosomal protein S5 domain 2-like 587 754 IPR020568 -
Lele32g0244 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Lele32g0244 815 ProSitePatterns Protein kinases ATP-binding region signature. 178 200 IPR017441 GO:0005524
Lele32g0244 815 ProSiteProfiles Protein kinase domain profile. 172 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0244 815 SUPERFAMILY Protein kinase-like (PK-like) 153 451 IPR011009 -
Lele32g0244 815 Gene3D Phosphorylase Kinase; domain 1 136 252 - -
Lele32g0244 815 SUPERFAMILY Ribonuclease PH domain 2-like 727 810 IPR036345 -
Lele32g0244 815 CDD RNase_PH_MTR3 602 808 - -
Lele32g0244 815 Pfam Protein kinase domain 175 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0244 815 CDD STKc_IRAK 178 451 - -
Lele32g0244 815 Pfam 3' exoribonuclease family, domain 1 601 725 IPR001247 -
Lele32g0244 815 FunFam receptor-like serine/threonine-protein kinase NCRK 146 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0244 Lele-ChrLele32 1495538 1504532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0244 87 471 Receptor kinase-like Gene Family AT2G28250 65.897 1.13e-164 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lele32g0244 Pkinase 1.2e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0259 29 1517136 1525887 Lele32g0244 32 1495538 1504532 hybridization
Lele30g1154 30 14462007 14472079 Lele32g0244 32 1495538 1504532 hybridization