Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0243 ATGGTCTTTGGAAATACCAGATCTGCAAGATTTCAAGATGATATTGAACAAGCAAACATCCGTGCAACTAACAGTGACAACGGGATCAAAGTTAAATACAACATTGATGGAGTACAAATACCAGAGCCTAGCAGCAGCAAAATGGCTCAGAAGAAGGAGACAGCAGGGAAAACTGGGAAGTTCTTGGAAGTAGTTCGAGATGAAGTGTGCATTGAGATTGGAATAATACCTGAAGTTATCCTCACAATCTTCAGAACAGTTGCAGATTTCTTTTACGTGTTTCAGATTTTCATGAAGTTTCGTACAGCTTATGTCGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATTGATTCTTCTAAGATTGCATTTAGGTACTTCAAAAAGAGTTTCTGGTTAGACTTTGTTGCAGCCATGCCTCTTCCACAGGTGTTGATTTGGCTTGTCATACCCTTCCTCAGGGGTTCGACCATGGCAAACACAAAAAATGTCCTTCGTTTCATCATCATCTTTCAGTATCTCCCTAGGCTCTTTCTTATTTTCCCTCTTTCATCACAAATTGTCAAGGCTACCGGAGTCGTGACACAAACGGCATGGGCCGGTGCTGCTTACAACCTCATGCTTTATATGTTGGCAAGCCACGGTTTAGGTGCTATTTGGTACCTTCTATCAATTGAGCGACAGGAAGCATGCTGGAGAAGTGTTTGTGACCACGAAAAGTCATTTGTCAATATGGATATTTTGACTGCTACAGGGTCAACGAAGCCAACAGGGTCGCCTGGTTCATTGCAAAATAATGCCAGAAACATAACATCTAATTCTCTACTCATTGGCGAGTGCAGTTCTCTAGGACAAAATCTTCTCACTAGCACTTTTGTTGGAGAAATAGTGTTTGCCATCATAGTTGCCACCCTTGGATTGGTTCTTTTTGCCTTGCTTATCGGTAATATGCAAACATATCTTCAATCAACAACTGTCCGCTTAGAAGAATGGAGAGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCTCCAGAACTAAGACAAGCTGTAAGAAAATATCATCAATATAAATGGTTGGCTACCCGAGGAGTTGATGAAGAAGCTCTTCTTAAAGGACTTCCCGTGGATCTTCGAAGAGACATCAAACGCCACCTTTGCCTTGACCTTGTCCGAGGAGTTCCATTATTTGATCAAATGGATGAGAGGATGCTGGATGCAATATGTGAGAGGCTGAAGCCTGCATTATGCACAGAGGGAACTTACCTTGTTCGTGAGGGTGATCCAGTGAATGAGATGCTGTTCATAATAAGGGGCCATCTGGATTCCTACACCACCAATGGAGGGCGAACCGGGTTCTTCAATTCATGCCAGATTGGCCCGGGCGATTTCTGTGGGGAGGAAATACTGACATGGGCATTAGACCCTAGACCAAGTGTGATACTTCCATATTCCACAAGAACAGTAAAATCCATCTCTGAAGTAGAAGCCTTTGCACTTATGTCAGAGGATCTCAAGTTTGTGGCGTCTCAAAAGTTCAAGAAAAGGAAACTGAGGGCTAAATTGTACCCAACTGATGCAGAGCCTGAAACACCAAGGTGTGGTGGCTCATCAGGCTTTGTTGTGTATGGATCGATGATGGGTAGGAGCACGGTAAAAGGGGCTAATATTCATTCCGACACAGTTTCTGGGGTTGTAAGCCCTCTTCAGAAGCCTGAAGAACCAGATTTTACTGTTGATGATTAG 1764 0.4337 MVFGNTRSARFQDDIEQANIRATNSDNGIKVKYNIDGVQIPEPSSSKMAQKKETAGKTGKFLEVVRDEVCIEIGIIPEVILTIFRTVADFFYVFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFKKSFWLDFVAAMPLPQVLIWLVIPFLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTQTAWAGAAYNLMLYMLASHGLGAIWYLLSIERQEACWRSVCDHEKSFVNMDILTATGSTKPTGSPGSLQNNARNITSNSLLIGECSSLGQNLLTSTFVGEIVFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPPELRQAVRKYHQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCQIGPGDFCGEEILTWALDPRPSVILPYSTRTVKSISEVEAFALMSEDLKFVASQKFKKRKLRAKLYPTDAEPETPRCGGSSGFVVYGSMMGRSTVKGANIHSDTVSGVVSPLQKPEEPDFTVDD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0243 587 SMART cnmp_10 402 533 IPR000595 -
Lele32g0243 587 Gene3D Helix hairpin bin 329 393 - -
Lele32g0243 587 Gene3D - 68 326 - -
Lele32g0243 587 ProSiteProfiles cAMP/cGMP binding motif profile. 402 487 IPR000595 -
Lele32g0243 587 PRINTS EAG/ELK/ERG potassium channel family signature 315 324 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele32g0243 587 PRINTS EAG/ELK/ERG potassium channel family signature 213 223 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele32g0243 587 PRINTS EAG/ELK/ERG potassium channel family signature 96 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele32g0243 587 PRINTS EAG/ELK/ERG potassium channel family signature 297 308 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele32g0243 587 PRINTS EAG/ELK/ERG potassium channel family signature 365 372 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele32g0243 587 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 527 - -
Lele32g0243 587 Pfam Ion transport protein 79 329 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele32g0243 587 SUPERFAMILY Voltage-gated potassium channels 73 324 - -
Lele32g0243 587 CDD CAP_ED 402 511 IPR000595 -
Lele32g0243 587 Gene3D Jelly Rolls 400 520 IPR014710 -
Lele32g0243 587 FunFam Cyclic nucleotide-gated ion channel 1 329 393 - -
Lele32g0243 587 FunFam Cyclic nucleotide-gated ion channel 1 400 518 - -
Lele32g0243 587 SUPERFAMILY cAMP-binding domain-like 332 515 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0243 Lele-ChrLele32 1488255 1491038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0243 61 528 Ion Channels AT2G28260 70.659 0.0 720