Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0235 ATGAAGGAAGAAGCTGAGAAAAGCTTGGATCCACAACTATGGCACGCGTGCGCCGGCGGTATGGTTCAGATGCCATCTCTGAACTCTAAAGTCTTCTACTTTCCTCAAGGACACGCCGAGCACGCCCAGGCCGGCGTCGATTTTGCGGCCTCCTTGAGGATTCCACCGCTCATTCTCTGCCGCGTGGCAGCTGTGAAATTCCTCGCAGACCCAGAAACCGACGAGGTCTTTGCCAAGATCAAGTTGATTCCTTTGAGAAACTCCGAGCTAGATGACGGCGACGGCGACGAAAACACTCACGGCTCTGAAAATTCGGAGAAGCCCGCCTCTTTCGCCAAGACCTTAACCCAGTCCGATGCTAACAATGGTGGAGGCTTCTCTGTTCCGAGATACTGTGCAGAGACCATATTCCCGCGGCTCGATTACTCGGCGGAGCCCCCGGTTCAAACCGTGATTGCGAAGGACGTCCACGGGGAAATTTGGAAGTTCAGGCATATCTACAGAGGGACACCTCGCCGTCACTTGCTGACAACAGGGTGGAGTACTTTCGTCAACCAGAAGAAACTCGTAGCAGGGGATTCTGTCGTGTTCCTGAGGGCCAAAAATGGCGATCTCTGTGTGGGGATTCGCCGCGCAAAGCGTGGGATCGGCGTTGGATCCGACTGCATCTCCGGTTGGAGCTCCGGTGCCGGGAACTGCGTGGGGCCGTATGGGGCTCTCAGCGTGTTGTTAAGAGAGGAGAACAAGCTTCTGCGATGCAATTCGAATGGTGGGAATTCAAATCCTGGGAGAGCAAGAGTGAGACCAGAATCTGTGATGGAAGCTGTGACACTTGCTGCGAGTGGTCAAGCATTCGAGGTTGTTTATTACCCACGAGCAAGTACTCCTGAATTCTGTGTGAAAGCTGAGGCTGTTAAGGCAGCCATGAGAATCCAATGGTGTTCTGGGATGAGATTCAAGATGGCGTTTGAGACAGAGGATTCTTCCAGGATTAGCTGGTTCATGGGCACTGTTGCTTCTGTTCAAGTTGTTGATCCTATTCGCTGGCCCAATTCTCCTTGGAGACTTCTTCAGGTTACTTGGGATGAACCAGATTTGTTACAGAATGTGAAGAGGGTTAGTCCATGGTTGGTTGAACTCGTATCGAACAGGCCGGTGATCCCTCTCATGCCGTTCTCTCCCCCTCGAAAGAAGATGCGGCTTCCTCAACACCCGGACTTCCCCTTCGACGGTCACTTTACGATACCGACCTTTCCAGTCGGCAACCATCTCGGGCCCAGCAGCCCCTTGTGTTGTCTTTCCGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTCGGAATATCTCTTTCAGATCTCCACCTAAACAATAAATTGCAGTTGGGGCTGCTTTCGAATAACATTCAGCAGCTTGATGTGCATCCCGGGGTTTCTAATGGCAATATAATGATGAGCCATGACAAGAAAAATGAGAGCTTGTCATGCTTGCTTACCATGGGAAATTCTAACAAGAGTTTGGAGAAATCTGATAATGTCAAGAGACACCAGTTTCTGCTTTTTGGACAGCCAATACTTACTGAGCAACAAATTTCTCAAAGCTGTCATGCCGAAGTGTGGTCTCAGAACTTCTCGCGTAAAAAGTTGCCAGATGAATGTAAGGATAAAGCAAAGAGCTTCTTGGGTGTATCCCAATCTGCAGTTCCGCAGCCGGGATTATCTTCTACAACCGACTTCTCTTGGCAACTCGGCTTGGATACGGGTCATTGCAAGGTTTTCATGGAGTCAGAAGACGTGGGGCGCACTCTAGACCTTTCGTGTCTCAGCTCTTATGAGGAGCTGTACCGGAAACTGGCCGACATGTTTGGACTCGAAAGATCCGAGATGTCGAGCCGTGTGCTCTACCGAGATGCTTCTGGTGCTGTCAAGCGAACAGGAGAAGAGCCCTTCTGTGACTTCATGAAAACAGCAAAAAGATTGACAATTCTGAACGATTCGGGCAGCAAAGATATTAGGAGGGCGTGGATTACAGGATCTCGAAATGGAGACCATGGACTGGACGCATCAAACAAGACAGGCTTTCTGAGCATATTTGCCTGA 2106 0.5047 MKEEAEKSLDPQLWHACAGGMVQMPSLNSKVFYFPQGHAEHAQAGVDFAASLRIPPLILCRVAAVKFLADPETDEVFAKIKLIPLRNSELDDGDGDENTHGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAKNGDLCVGIRRAKRGIGVGSDCISGWSSGAGNCVGPYGALSVLLREENKLLRCNSNGGNSNPGRARVRPESVMEAVTLAASGQAFEVVYYPRASTPEFCVKAEAVKAAMRIQWCSGMRFKMAFETEDSSRISWFMGTVASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNRPVIPLMPFSPPRKKMRLPQHPDFPFDGHFTIPTFPVGNHLGPSSPLCCLSDNAPAGIQGARHAQFGISLSDLHLNNKLQLGLLSNNIQQLDVHPGVSNGNIMMSHDKKNESLSCLLTMGNSNKSLEKSDNVKRHQFLLFGQPILTEQQISQSCHAEVWSQNFSRKKLPDECKDKAKSFLGVSQSAVPQPGLSSTTDFSWQLGLDTGHCKVFMESEDVGRTLDLSCLSSYEELYRKLADMFGLERSEMSSRVLYRDASGAVKRTGEEPFCDFMKTAKRLTILNDSGSKDIRRAWITGSRNGDHGLDASNKTGFLSIFA 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0235 701 MobiDBLite consensus disorder prediction 88 109 - -
Lele32g0235 701 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 668 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele32g0235 701 SMART B3_2 111 213 IPR003340 GO:0003677
Lele32g0235 701 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Lele32g0235 701 FunFam Auxin response factor 109 213 - -
Lele32g0235 701 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele32g0235 701 Gene3D - 313 385 - -
Lele32g0235 701 MobiDBLite consensus disorder prediction 88 103 - -
Lele32g0235 701 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Lele32g0235 701 Gene3D - 588 673 - -
Lele32g0235 701 Gene3D - 109 213 IPR015300 -
Lele32g0235 701 ProSiteProfiles PB1 domain profile. 589 667 IPR000270 GO:0005515
Lele32g0235 701 FunFam Auxin response factor 313 386 - -
Lele32g0235 701 SUPERFAMILY DNA-binding pseudobarrel domain 104 213 IPR015300 -
Lele32g0235 701 CDD B3_DNA 110 211 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0235 Lele-ChrLele32 1425246 1428131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0235 1 673 B3 DNA Binding Superfamily AT4G30080 60.580 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele32g0235 B3 1.9e-21 CL0405