Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0219 ATGATTATGCATTTCCATTTGCTCAAGAGTACCACAAGTTACCCTGTATTATTATTAGTAGCTGGGTTTTTGATAAGCTGGCGCTTTGCAACCCCTGTTTTGGAAGGGGAGAGTGTTACGGCATCGTTAAGGTTCTCTCATCCCTATGTTAGTCCCCCGAGTGAATGTAACTTCCCACCTTCACCCTTCCTTACAATCGCCGGTCACCTGCATCATGCTCTGACGCCACCGTTATTCTCGTCCAATCATGCGGCGGTTCTGTGTCTGAGATCCGAACGTTTTTCTTGCTTCCCGTTTATTCTGTCTCGCCACCTGGAATTTGGTCGAGGGAAATTTCCGGGAGCTCTCGTTAATTGGCTGGAAGATGAAGCGGTGGTGAAAAAGTTTTTGAAAATGAATTCAAGGGAAGGAGTGAATGATGGTCGAACTAGAATTGAACCAAATGATTCTCTTCTCCCTGGTCTTATTGATGATGTTGCCCTGAATTGTCTTGCGTGGGTTAGTAGATCGGATTATGCTTCACTATCTTGTATAAATAAAAGATACAATAAGCTGATTAAAAGTGGGTATTTATATGGGTTGAGGAAACAGTTGGGACTTGTGGAGCATTGGGTTTATTTGGTGTGTGATCCAAGGGGATGGGAGGCATTTGACACCATGAAAAAGAAATGGATGGCATTACCTAAGATACCGTGTGATGAGTGCTTCAACCATGCAGACAAGGAGTCCTTGGCTGTGGGCAGTGAGCTATTGGTATTTGGTCGGGAATTGTTGGATTTTGCTATTTGGAAGTATAGCTTGATTTTTCATGGTTGGGTTAAGTGTCAGGGGATGAATGGGCCGCGCTGTTTGTTTGGATCTGGTAGTCTTGGTCTAATTGCCATTGTTGCAGGTGGAAGTGATAAAAATGGAAATGTTCTAAAATCAGCTGAGTTGTATGACTCTTCTTCTGGTAGATGGGAACTGTTACCAAACATGCACACACCACGTAGATTGTGCTCTGGTTTTTTCATGGATGGCAAATTCTATGTGATTGGTGGAATGTCAAGTCCTACAGTTTCATTGACCTGTGGAGAGGAGTATAATCTTGAGACGAGAAGTTGGCGGAAAATAGAGGATATGTATCCGTTTGTTAATGGGGCTGCTCAGGCACCCCCACTTGTGGCCGTTGTGGACAACCAGTTATTTGCTGTGGAGCATCTAACCAACATGGTGAAGAAGTACAACAAGATAAAGAATGCCTGGGATGAATTGGGAAGGCTTCCAGTCCGGGCTGATTCTTCTAATGGATGGGGTTTGGCTTTCAAGGCTTGCGGGAAGCACCTTTTGGTCGTGGGTGGTCAGAGAGGTCCTGAAGGTGAAGCTGTTGTGCTGAATTCCTGGTGCCCTGCATCAGGGGTCAAAAATGGCACCTTAGATTGGCAGGTTCTTGCTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGTTGTTGA 1488 0.4496 MIMHFHLLKSTTSYPVLLLVAGFLISWRFATPVLEGESVTASLRFSHPYVSPPSECNFPPSPFLTIAGHLHHALTPPLFSSNHAAVLCLRSERFSCFPFILSRHLEFGRGKFPGALVNWLEDEAVVKKFLKMNSREGVNDGRTRIEPNDSLLPGLIDDVALNCLAWVSRSDYASLSCINKRYNKLIKSGYLYGLRKQLGLVEHWVYLVCDPRGWEAFDTMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELLDFAIWKYSLIFHGWVKCQGMNGPRCLFGSGSLGLIAIVAGGSDKNGNVLKSAELYDSSSGRWELLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYNLETRSWRKIEDMYPFVNGAAQAPPLVAVVDNQLFAVEHLTNMVKKYNKIKNAWDELGRLPVRADSSNGWGLAFKACGKHLLVVGGQRGPEGEAVVLNSWCPASGVKNGTLDWQVLAVKEHVGVFVYNCAVMGC 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0219 495 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 146 495 - -
Lele32g0219 495 SMART kelc_smart 341 393 IPR006652 GO:0005515
Lele32g0219 495 SMART kelc_smart 293 340 IPR006652 GO:0005515
Lele32g0219 495 FunFam F-box/kelch-repeat protein SKIP11 197 479 - -
Lele32g0219 495 Pfam Kelch motif 329 374 IPR006652 GO:0005515
Lele32g0219 495 Pfam Kelch motif 281 326 IPR006652 GO:0005515
Lele32g0219 495 Gene3D - 202 483 IPR015915 GO:0005515
Lele32g0219 495 SUPERFAMILY Kelch motif 212 452 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0219 Lele-ChrLele32 1301267 1311554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0219 147 325 EF-hand Containing Proteins AT4G39560 26.064 1.10e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0230 29 1330317 1331904 Lele32g0219 32 1301267 1311554 hybridization
Lele30g1180 30 14656876 14658931 Lele32g0219 32 1301267 1311554 hybridization