Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0213 ATGGCTTCTTCCAAAAATTCGAAGACGGAACACAACTGCGAAGCGGCAGACAGCTCCAAAACAGCAAAGAAAGCTGCTAAGCCCAGAAAAGAGAAGCACCTGGACAAGAAAAACAAGAGTACTATGAAGAAGAAGAAACTTCACAATTCTGATATGAATAAGGAAGATAAAGAGATTGTTGTTCCATCTTCCAGCACCGAGTCCCATGAACAAGCCCAAGAGGAAGGGCATCGGGAAGACAAGACCGAGATCACGAATGGGCGAACCAGTGCAACGAATCCCAAAAAAGACAAAGTCAAAGGAAAGAAATATGATGACGTAGATGAGGCTGAAGGGAAAGGAGACGCCAAAGGCAACGTATTTCCCATGAATCGTATCAGGACGATAATTAGGGGCCAAGATCTTGACTTGCGTGTTTCCCAGGAAGCCATATTTGCCATCAACAAAGCCACGGAGATGTTCCTTGAACAATATACGCGGGACACTCATGCTTCATGTGTTCGGGATCGAAAAAAATCCCTTGCTTACAAACACCTATCATCTGTTGTTAGTAAGCAGAGCAGATACGACTTTCTATCAGATTTTGTCCCGGAGAAAATAAAAGCGGAGGATGCATTAAGGGAGAGAAATTCAAATTCCGGTGTGAATGGTGGTTAG 657 0.4399 MASSKNSKTEHNCEAADSSKTAKKAAKPRKEKHLDKKNKSTMKKKKLHNSDMNKEDKEIVVPSSSTESHEQAQEEGHREDKTEITNGRTSATNPKKDKVKGKKYDDVDEAEGKGDAKGNVFPMNRIRTIIRGQDLDLRVSQEAIFAINKATEMFLEQYTRDTHASCVRDRKKSLAYKHLSSVVSKQSRYDFLSDFVPEKIKAEDALRERNSNSGVNGG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0213 218 MobiDBLite consensus disorder prediction 45 63 - -
Lele32g0213 218 MobiDBLite consensus disorder prediction 1 115 - -
Lele32g0213 218 MobiDBLite consensus disorder prediction 70 85 - -
Lele32g0213 218 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 121 183 IPR003958 -
Lele32g0213 218 SUPERFAMILY Histone-fold 92 192 IPR009072 GO:0046982
Lele32g0213 218 MobiDBLite consensus disorder prediction 10 24 - -
Lele32g0213 218 MobiDBLite consensus disorder prediction 93 115 - -
Lele32g0213 218 MobiDBLite consensus disorder prediction 25 44 - -
Lele32g0213 218 Gene3D Histone, subunit A 66 198 IPR009072 GO:0046982
Lele32g0213 218 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 77 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0213 Lele-ChrLele32 1277821 1279745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0213 121 179 CCAAT-HAP5 Transcription Factor Family AT1G07980 49.153 1.87e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele32g0213 CBFD_NFYB_HMF 5.2e-12 CL0012