LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele32g0207	ATGGAAGATCCCGATGCACAAGTGATAGCGCTGTCGCCCAAGTCCTTAATGGCCACCAACTGTTTTGTGTGTGAAATCTGCAAGAAGGGGTTCCAGAGAGACCAGAATCTGCAGCTGCACCGCCGCTGCCACAACCTCCCCTGGAAGCTCCGGCAGAGAAGTGACAAAGAAGCGGCCTGTAAGAAAGTGTACGTGTGCCCTGAAAAGACGTGCGTCCACCACGATCCTTCCAGAGCCCTGGGAGACCTCACCGGGATCAAGAAGCACTACAGCAGAAAACATGGCGAGAAGAAGTGGAACTGCCACAAGTGCTCCAAGAAATACGCCGTTCACTCAGACTGGAAGGCGCATATAAAGATTTGCGGCACTAGAGAGTACAAATGTCACTGTGGCACTCTTTTCTCCAGGAAAGACAGCTTCTTGACGCATAGAGCTTTCTGTGATGTATTGGCGGAAGAAAGTACCCGGATAAGCTTCGTTCCAGAAGCACCTAGAATCCCTCAGATTTTTACTGGCTATTATCCAGGCTATGGAGGTTCATCAGAAACACTGATCCAGGACAATTCTAGCGTGCCTGATTTGATGCAAACCATGAACATACTCGCGACTTCTTCTTCGTCTTCCTCGTGGGTGAAACCATACCCAGAAGCATCATTCGAAAGTTTAGCCAATCTGGCCATGTCTGGGGTACCTCGCCTACTGAAGGAGGAGGAAGAAGAAGAGAACAAAGGAGGGTTGTCGTATTTGTATGGTAGTAATTATCAAAAGCCATCGCAAGTAGGCTTCTCTCAGCCTCATCACATGTCATCACCCACTTCACTGTTACAAAAAGTAACCCAGATGGGAGCTACAGGAACCAACCATATCGACATTTTTGGGTTCATGGGTGGATCCTTACCACTCTCCAACAGCACGACGACGCCGTTTATTAGAAATGGCGATCAAAACTTGAGCGACTTGGTGATCTCACAGGGAAACACCAATAATGTTGGAGTTGGAGGGGATGGTGATGGTCATGGATTGGTATTGAATGGTTGGGACTCGAGCCACTTTGTGAGAAGCGGCGAGAATTTAGAACAAATGGAATTGGGTGAGTTAACCAGAGATTTTCTAGGCGTTGGTGAAAAAGAGTTAGCCAAGTTTGATGCAATTGGCTCGGCTGCTCAGCCATGGAGCTGA	1179	0.4835	MEDPDAQVIALSPKSLMATNCFVCEICKKGFQRDQNLQLHRRCHNLPWKLRQRSDKEAACKKVYVCPEKTCVHHDPSRALGDLTGIKKHYSRKHGEKKWNCHKCSKKYAVHSDWKAHIKICGTREYKCHCGTLFSRKDSFLTHRAFCDVLAEESTRISFVPEAPRIPQIFTGYYPGYGGSSETLIQDNSSVPDLMQTMNILATSSSSSSWVKPYPEASFESLANLAMSGVPRLLKEEEEEENKGGLSYLYGSNYQKPSQVGFSQPHHMSSPTSLLQKVTQMGATGTNHIDIFGFMGGSLPLSNSTTTPFIRNGDQNLSDLVISQGNTNNVGVGGDGDGHGLVLNGWDSSHFVRSGENLEQMELGELTRDFLGVGEKELAKFDAIGSAAQPWS	392

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele32g0207	392	PANTHER	SERINE/THREONINE-PROTEIN KINASE RIO	2	376	IPR031140	-
	Lele32g0207	392	FunFam	protein indeterminate-domain 5, chloroplastic-like	77	156	-	-
	Lele32g0207	392	FunFam	protein indeterminate-domain 12-like	1	70	-	-
	Lele32g0207	392	SMART	c2h2final6	99	119	IPR013087	-
	Lele32g0207	392	SMART	c2h2final6	64	94	IPR013087	-
	Lele32g0207	392	SMART	c2h2final6	22	44	IPR013087	-
	Lele32g0207	392	ProSitePatterns	Zinc finger C2H2 type domain signature.	24	44	IPR013087	-
	Lele32g0207	392	Gene3D	Classic Zinc Finger	58	147	-	-
	Lele32g0207	392	ProSiteProfiles	Zinc finger C2H2 type domain profile.	22	44	IPR013087	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele32g0207	Lele-ChrLele32	1250577	1252301	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele32g0207	1	171	IDZ Gene Family	AT3G50700	76.023	1.59e-94	288

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Lele32g0207		None	None	None

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