Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0207 ATGGAAGATCCCGATGCACAAGTGATAGCGCTGTCGCCCAAGTCCTTAATGGCCACCAACTGTTTTGTGTGTGAAATCTGCAAGAAGGGGTTCCAGAGAGACCAGAATCTGCAGCTGCACCGCCGCTGCCACAACCTCCCCTGGAAGCTCCGGCAGAGAAGTGACAAAGAAGCGGCCTGTAAGAAAGTGTACGTGTGCCCTGAAAAGACGTGCGTCCACCACGATCCTTCCAGAGCCCTGGGAGACCTCACCGGGATCAAGAAGCACTACAGCAGAAAACATGGCGAGAAGAAGTGGAACTGCCACAAGTGCTCCAAGAAATACGCCGTTCACTCAGACTGGAAGGCGCATATAAAGATTTGCGGCACTAGAGAGTACAAATGTCACTGTGGCACTCTTTTCTCCAGGAAAGACAGCTTCTTGACGCATAGAGCTTTCTGTGATGTATTGGCGGAAGAAAGTACCCGGATAAGCTTCGTTCCAGAAGCACCTAGAATCCCTCAGATTTTTACTGGCTATTATCCAGGCTATGGAGGTTCATCAGAAACACTGATCCAGGACAATTCTAGCGTGCCTGATTTGATGCAAACCATGAACATACTCGCGACTTCTTCTTCGTCTTCCTCGTGGGTGAAACCATACCCAGAAGCATCATTCGAAAGTTTAGCCAATCTGGCCATGTCTGGGGTACCTCGCCTACTGAAGGAGGAGGAAGAAGAAGAGAACAAAGGAGGGTTGTCGTATTTGTATGGTAGTAATTATCAAAAGCCATCGCAAGTAGGCTTCTCTCAGCCTCATCACATGTCATCACCCACTTCACTGTTACAAAAAGTAACCCAGATGGGAGCTACAGGAACCAACCATATCGACATTTTTGGGTTCATGGGTGGATCCTTACCACTCTCCAACAGCACGACGACGCCGTTTATTAGAAATGGCGATCAAAACTTGAGCGACTTGGTGATCTCACAGGGAAACACCAATAATGTTGGAGTTGGAGGGGATGGTGATGGTCATGGATTGGTATTGAATGGTTGGGACTCGAGCCACTTTGTGAGAAGCGGCGAGAATTTAGAACAAATGGAATTGGGTGAGTTAACCAGAGATTTTCTAGGCGTTGGTGAAAAAGAGTTAGCCAAGTTTGATGCAATTGGCTCGGCTGCTCAGCCATGGAGCTGA 1179 0.4835 MEDPDAQVIALSPKSLMATNCFVCEICKKGFQRDQNLQLHRRCHNLPWKLRQRSDKEAACKKVYVCPEKTCVHHDPSRALGDLTGIKKHYSRKHGEKKWNCHKCSKKYAVHSDWKAHIKICGTREYKCHCGTLFSRKDSFLTHRAFCDVLAEESTRISFVPEAPRIPQIFTGYYPGYGGSSETLIQDNSSVPDLMQTMNILATSSSSSSWVKPYPEASFESLANLAMSGVPRLLKEEEEEENKGGLSYLYGSNYQKPSQVGFSQPHHMSSPTSLLQKVTQMGATGTNHIDIFGFMGGSLPLSNSTTTPFIRNGDQNLSDLVISQGNTNNVGVGGDGDGHGLVLNGWDSSHFVRSGENLEQMELGELTRDFLGVGEKELAKFDAIGSAAQPWS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0207 392 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 2 376 IPR031140 -
Lele32g0207 392 FunFam protein indeterminate-domain 5, chloroplastic-like 77 156 - -
Lele32g0207 392 FunFam protein indeterminate-domain 12-like 1 70 - -
Lele32g0207 392 SMART c2h2final6 99 119 IPR013087 -
Lele32g0207 392 SMART c2h2final6 64 94 IPR013087 -
Lele32g0207 392 SMART c2h2final6 22 44 IPR013087 -
Lele32g0207 392 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Lele32g0207 392 Gene3D Classic Zinc Finger 58 147 - -
Lele32g0207 392 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 44 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0207 Lele-ChrLele32 1250577 1252301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0207 1 171 IDZ Gene Family AT3G50700 76.023 1.59e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele32g0207 None None None