Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0196 ATGGAATCCATAAGTGATCCAATCCCAAACACTCCAAGTCCCACTTCCTCTTTCCCTCTCTCTAACTCTCCTTCTTCTCCATCTTCTTCCCCTCCAAATCCAATAACTCCACAAGTGGTCGTAAGCCCTTGTGCTGCTTGCAGGATTTTAAGACGCAGATGTGCCGAGAAATGCGTTCTCGCTCCCTATTTCCCTCCTTCTGAACCCGCCAAGTTCACCATTGCTCACAGAGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGCCGCAGAGGGCTGATGCAGTGAGCAGCATGGTGTACGAGGCGAGTGCAAGAATAAGAGACCCAGTGTATGGTTGTGCGGGTGCGATTTGTCAACTTCAGAAGCAAGTGAACGAGCTTCAAGCTCAATTGGCTAAGGCTCAAGCCGAGCTTGTGAACATGCAGTTGCAGCAAGCCAATCTGGTGGCTCTTCTCTGCATGGAAGTGGATCAAACAAATCAGACTCAGACTGAAACGTCTCCTTCAAGTACTCCTCCTCAGGAGTATTATTCTTCGCCACCATCGCCACCATTCAAAGATACGAACTTCATTAATTCAAGCAACCTCAACTTCTTCGCGGAAAGCACTGGCCTTAACTCTTTGTGGGAGCAGCCACTTTGGACATGA 663 0.4902 MESISDPIPNTPSPTSSFPLSNSPSSPSSSPPNPITPQVVVSPCAACRILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPEPQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALLCMEVDQTNQTQTETSPSSTPPQEYYSSPPSPPFKDTNFINSSNLNFFAESTGLNSLWEQPLWT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0196 220 Coils Coil 122 149 - -
Lele32g0196 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 42 181 - -
Lele32g0196 220 MobiDBLite consensus disorder prediction 1 24 - -
Lele32g0196 220 MobiDBLite consensus disorder prediction 165 189 - -
Lele32g0196 220 Pfam Lateral organ boundaries (LOB) domain 43 140 IPR004883 -
Lele32g0196 220 MobiDBLite consensus disorder prediction 1 34 - -
Lele32g0196 220 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0196 Lele-ChrLele32 1185830 1186961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0196 38 220 AS2 family AT1G07900 61.081 1.89e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele32g0196 LOB 3.9e-41 No_clan