Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0174 ATGTACCCGCCCTCTAACTCTACATTCTCACGCGCCGCCAACTGCATCGATCATTTGCCGTCTCCAACAGCAGCCAACGTGCAACTACCCTATCCTTCAGTTACTTCAATGCATTCCATCTCCACTTCTCCGCAGCACCTCATTCCCGACCAGCACGCCATCCCTGATTTCGACTCGCTGCTCAACTCGGAGATGAGCCTCAACAATAGTTGCTGCAGCGGTTGTAGCAGCTATGGCTCGCCCAGTTCGCTGGCGACCTATAGAACTCAACGACCAAGCTTGATGCAGAGGAGCGTGAGCAGCCACTCGCTCCGTAAGAATGAATATCGCCACCCTGTTTCCGCTCTGTTTGCCGAGTTCCTCGACTCCGACGACGGTCCGGTACGCAGAGTGCACAGTACTGGTGATTTGCAGAGGAATCATGGGTCAGAGATGGCATTGTCAAGCGAAAGTAGTATGATCATAGAAGGGATGAGCAGAGCATGCCGTTATAGCCCAGAGGAGAAGAAGGCGAGGATTGAGAGATATAGGAGCAAGCGAAATCTCAGAAACTTCAACAAGAAAATCAAGTATGCTTGCAGGAAGACATTAGCAGACAGCAGGCCACGCATCAGAGGAAGATTTGCGCGGAACGAAGAAACTGATAAGATCCCTGCAGTTCAGTGGAGCCAGGAAAATGGTGTTGGAGCTGAGGAAGAAGATGAGGAAGAGGACAATTGGGTTAATTTCTTTGATAATTTAGTTGCTGCAAATAATATTAATGTTCAAGAGCCTCAAGATACTACTTCCTATGGTCTCATGTTTTAG 807 0.4907 MYPPSNSTFSRAANCIDHLPSPTAANVQLPYPSVTSMHSISTSPQHLIPDQHAIPDFDSLLNSEMSLNNSCCSGCSSYGSPSSLATYRTQRPSLMQRSVSSHSLRKNEYRHPVSALFAEFLDSDDGPVRRVHSTGDLQRNHGSEMALSSESSMIIEGMSRACRYSPEEKKARIERYRSKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNEETDKIPAVQWSQENGVGAEEEDEEEDNWVNFFDNLVAANNINVQEPQDTTSYGLMF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0174 268 Pfam CCT motif 170 211 IPR010402 GO:0005515
Lele32g0174 268 ProSiteProfiles CCT domain profile. 169 211 IPR010402 GO:0005515
Lele32g0174 268 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 64 224 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0174 Lele-ChrLele32 1004716 1006428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0174 165 216 C2C2-CO-like Transcription Factor Family AT5G15850 50.000 1.80e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele32g0174 CCT 6.2e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0183 29 1039052 1041126 Lele32g0174 32 1004716 1006428 hybridization
Lele30g1222 30 14966614 14968827 Lele32g0174 32 1004716 1006428 hybridization