Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0172 ATGATGAATCGTAGAAAAATTGTCTTCTTTATCTGTGGCTTTTCAATTCTGCCGTTGCTATGCTTTTCTGCCAGCTTCGTTCCACAAGACAATTATCTTATAGACTGTGGAGCTGCTTCAAATACTTCATTTGATCGCCGCAATTTCGCGGCGGATGCGTTCTACAAGGATCTCCTTTATACCAAACGTGATGTTCTCGCCACTACCTCTTCAAAATCAATTGCTTCCTCCGCCGATTCGCCTCTCTATCAAACCGCAAGAGTCTTCAGTGAACAGGCAAAGTACACATTCTCGATCAGCCAAAAGGGGAGACATTGGATCCGTCTCTATTTCTATCCATTTGAGTACCAGAACTTCGATATGAGTACTGCAAATTTTGCTGTCACCACCCAAAACAATATCCTTCTCACTAACTTCTCTGTGCAGAAAAATCCTGTCGTGAAGGAATACTCCGTGAATGTGACTTCTGACATCCTTGTGATCACCTTTACTCCTTCGAGCAATTCCTTTGCGTTCGTAAATGCCATTGAAGTTGTTTCAGTACCCGATGAACTCATTGCTGATGACGCTTCCACCATAAATCCACTACAAAGTTTCTCTGGGTTGGTGACACTGGCATTTGAGACCGTTTGGAGGATTAACATGGGTGGCCCAACTGTCTCCTCTGCAAATGATACCCTTCACCGGACCTGGGTACCAGACCAAAATTTTCTTGTCAATCCCGGCCTTGCTACCAATTTTACAAATATGGCTGCTGTTAACTATGTAGGCGGTGGGGCAACAGAGAATATTGCTCCACGTACAGTCTATGGTACTGCCACAGAAATGAACTCAAGCAATGATCCTCTTAGTAATTTCAATGTGACCTGGCAGTTTGACGTAGATCCAGGATTTCAGTATCTTGTTCGACTTCACTTTTGTGACATAGTTAGCAAAAGTCTCAACGAACTTTACTTCAACGTCTATGTCAACTCCTACATGGCGGAAAAAAATATGGATCTCAGCACTTCGAGTAACAATGTTTTGGGTGCTCCATTTTACAAGGATTTTGTTACAGCCCCAACTGATGGCAAGAAAATTCGTGTAAGTGTCGGCCTGCCTTCTTTAGACAGTGATTACCCGAATGCCATTTTAAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGCGTAGGAACAGCTACAATTGGTACTGGTTCAACAAACTCAAAGAAGAAAGTAGCCATTATAGTGGGTGTGGTAGTTGGGACATTGTGTGCAGTGGTCTTGGCTGGATTTTTCTTTGTATTGTGCAGAAGAAAACGTTTGACACGACAAGGCCTTTCAAAGACATGGGTTCCCTTATCCATTAATGATGGAACTTCCCATACCATGGGAAGCAAATATTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTAGGGTATCGCATCCCATTTGCGGCAATTCAAGAGGCTACAAACAATTTTGATGAGGGCTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTAAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCTCGGTCCCAGCAAGGGCTTGCAGAGTTCCATACTGAAATCGCAATGCTATCTCAGTTCCGTCATCGCCATTTGGTGTCATTGATAGGGTATTGTGATGACAAAAATGAAATGATCTTGATATATGAATATATGGAAAACGGAACTCTCAAGAGCCATCTCTATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAAGAAAGACTGGAGATCTGTATTGGAGCAGCTAGAGGACTACATTACCTTCACACTGGCTATGCCAAAGCAGTTATACATCGAGATGTGAAGTCTGCAAATATCCTACTTGACGAGAACCTTATGGCTAAAGTTGCTGATTTTGGGCTATCAAAGACAGGTCCTGAAATTGATCAGACACATGTGAGCACAGCAGTAAAAGGAAGTTTTGGATACCTTGATCCTGAGTATTTCCGTAGGCAACAATTAACAGAAAAATCAGATGTTTATTCGTTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTAATAGACCCATCACTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCCTACGTTGGCAGGGAAGATCAGACCGGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTTCAGCTTCAGGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAACATGATTGGTGAACTCTCTCCACAGATAAACAATTTCAACCACGATGCAAGTGTTTCTGCTGCTCAGTTTGAAGCTTCAGCCACAGATGACCTGTCTGGTGTTTCAATGAGTAGGGTTTTCTCACAGCTGGTGAAGTCTGAGGGGAGGTGA 2505 0.4327 MMNRRKIVFFICGFSILPLLCFSASFVPQDNYLIDCGAASNTSFDRRNFAADAFYKDLLYTKRDVLATTSSKSIASSADSPLYQTARVFSEQAKYTFSISQKGRHWIRLYFYPFEYQNFDMSTANFAVTTQNNILLTNFSVQKNPVVKEYSVNVTSDILVITFTPSSNSFAFVNAIEVVSVPDELIADDASTINPLQSFSGLVTLAFETVWRINMGGPTVSSANDTLHRTWVPDQNFLVNPGLATNFTNMAAVNYVGGGATENIAPRTVYGTATEMNSSNDPLSNFNVTWQFDVDPGFQYLVRLHFCDIVSKSLNELYFNVYVNSYMAEKNMDLSTSSNNVLGAPFYKDFVTAPTDGKKIRVSVGLPSLDSDYPNAILNGLEIMKMSNSKGSLSVGTATIGTGSTNSKKKVAIIVGVVVGTLCAVVLAGFFFVLCRRKRLTRQGLSKTWVPLSINDGTSHTMGSKYSNGTTLSAASNLGYRIPFAAIQEATNNFDEGWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFHTEIAMLSQFRHRHLVSLIGYCDDKNEMILIYEYMENGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDASVSAAQFEASATDDLSGVSMSRVFSQLVKSEGR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0172 834 Gene3D - 205 388 - -
Lele32g0172 834 Gene3D - 30 181 - -
Lele32g0172 834 FunFam Receptor-like protein kinase FERONIA 206 388 - -
Lele32g0172 834 Pfam Malectin-like domain 34 386 IPR024788 -
Lele32g0172 834 Gene3D Phosphorylase Kinase; domain 1 456 569 - -
Lele32g0172 834 FunFam receptor-like protein kinase FERONIA 458 569 - -
Lele32g0172 834 CDD STKc_IRAK 500 765 - -
Lele32g0172 834 Gene3D Transferase(Phosphotransferase) domain 1 570 787 - -
Lele32g0172 834 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0172 834 SMART serkin_6 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0172 834 FunFam Putative receptor-like protein kinase 31 182 - -
Lele32g0172 834 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Lele32g0172 834 FunFam Receptor-like protein kinase FERONIA 570 785 - -
Lele32g0172 834 SUPERFAMILY Protein kinase-like (PK-like) 472 765 IPR011009 -
Lele32g0172 834 Pfam Protein tyrosine and serine/threonine kinase 499 692 IPR001245 GO:0004672|GO:0006468
Lele32g0172 834 PANTHER OS07G0166700 PROTEIN 481 771 IPR045272 GO:0004714|GO:0006468
Lele32g0172 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0172 Lele-ChrLele32 993991 996495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0172 2 834 Receptor kinase-like Gene Family AT3G46290 67.063 0.0 1130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele32g0172 Malectin_like 1.6e-42 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0182 29 1030163 1032667 Lele32g0172 32 993991 996495 hybridization
Lele30g1224 30 14977587 14980236 Lele32g0172 32 993991 996495 hybridization