Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0170 ATGATCAATCCATTTCCCAGCCAAGGCAGAAGAGTCCCGTGGGAGCGGATCTCAATCCGAGTGGGCCCCCACAGCCCGTTTCGCTCTCTTGACCCAGACTCTACTCTTCTAAACTTGACTTCTTTCTTCATCGCTGATCTGCTCTTCAGGTTGTTGAGTGGTTCAAAGGAAAAGCTCTCTACGAAGTGCACTGACTCTGAATACAAGCAGATTATTTTCCGCAAAGGGATGACTTATTGCATGATCTTTGCTGGTAGGTCATTTGCTACGTCATTCTCTGGCCAGTCTGGTGCTGCCTCCCCAGTTTTCCATCATAGTGGGGCTATCCAGGGATTGCACAACATCCACGGCAGCTTTAATGTTCCTAATATGCCGGGTACACTTACATCAAGAAATTCAACAATAAATAGCATCCCGTCTGGAGGGGTTCAACAGCCTACTGGGGGCCTTTCTAGTGGAAGATTTTCATCAAATAATCTTCCTGTTGCTTTTTCTCAGCTAACTCATGGAAGCTCTCATGGACATTCAGGAGTAATAAACAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGAGGCTCTATTCCTGGGATTCTTCCATCATCGGCTGCAATTGGTAACAGAAATACTGTTCCAGGATTGGGAGTATCCCCTATTTTGGGAAATGCAGGTTCTCGAATTACAAGTTCTATGGGGAACATGGTTGGTGGAGGGAACATTGGGAGGAGCATTAGCTCTGCTGGAGGATTGTCTGTGCCTGGTCTTGCTTCTCGTCTAAATTTAAGTGCAAACAGTGGATCTGGTGGTTTAAGTGTGCCAGGACAGAATCGGTTGCTGAGTGGCGTGCTTCCACAAGGATCACCCCAAGTTATTTCAGTGCTAGGAAATTCTTATCCTAGTCCTGGAGGTCCCCTTGCCCAAAGCCATATTCAAGCATTAAATAATTTGAACTCAATGGGGATGTTGAGTGATATGAACTCGAATGACAGCTCCCCTTTTGACATCAATGACTTCCCTCAATTGACAAGTCGACCCAACTCTGCTGGAGGGCCCCAAGGACAGTCGGGTTCTTTGCGAAAACAGGGTCTTGGGGTTAGTCCCATGGTCCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTCTACCAGGATTTAAAGGTGGCAATACAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGAGAATGCTGTGTCCATGGTGCAATCTCAGCATTTTCCTATGGGAAGGTCTTCTGGTTTCAGCTTAGGGGGGGCATATTCATCACATCGATCACAGCAACAAGACGCTCCATCTGTCAGTAGTGTTGATGTCTCCTTTTCATCTGCAAACAATGAGGAACTTCTCCATCTACACGGGTCAGATATATTTCCAGCATCGCATTCAACCTATAATTCCCAGACTAGTGGAGCTTCTGGCATTGGATTAAGGCCTCTTAATTCTCCAAATACTGTTTCTGGTATGGGATCATATGACCAGCTTATTCAGCAATACCAACGGCACCAGAGCCAGAACCAGTCCCAGTTTCGTTTTCAACAAATGTCAACTGCAAATCAGTTTTTTAGGGATCAAGGCATGAAATCCTTTCAAACTTCCCAATCGACACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGATTTGACATCTCTTGCACTTGGAATTGATCTTACAACACTTGGGTTAAATTTAAATTCATCAGAAAATCTCCACAAGACTTTTGGATCTCCATGGTCTGATGAACCCGCTAAGGGAGATCCAGAGTTCACAGTGCCACGATGCTATTATGTTAAACAGCCACCTGCCCTGAATCATGGCTATTTTTCAAAGTTTACAGCGGAAACATTGTTCTACATATTTTACAGTATGCCCAAGGATGAAGCTCAAATATACGCCGCAAATGAGCTTTACAATAGAGGCTGGTTGTATCACAAAGAAGAACATTTTTGGTTTATAAGAGTTCCTAACATGGAGCCGCTTGTCAAAACAAACACGTATGAGAGGGGATCTTACCACTGCTTTGATCCGAACACGTTTGAAACAATTCGTAAGGATAATTTTGTCGTTCATTATGAGTTGTTGGAAAAACCCACCCCTGCCTCATCATTGAGGGGGAAGGGAAACGTGTGA 2211 0.4423 MINPFPSQGRRVPWERISIRVGPHSPFRSLDPDSTLLNLTSFFIADLLFRLLSGSKEKLSTKCTDSEYKQIIFRKGMTYCMIFAGRSFATSFSGQSGAASPVFHHSGAIQGLHNIHGSFNVPNMPGTLTSRNSTINSIPSGGVQQPTGGLSSGRFSSNNLPVAFSQLTHGSSHGHSGVINRGGISVVGNPGFSSSTNGVGGSIPGILPSSAAIGNRNTVPGLGVSPILGNAGSRITSSMGNMVGGGNIGRSISSAGGLSVPGLASRLNLSANSGSGGLSVPGQNRLLSGVLPQGSPQVISVLGNSYPSPGGPLAQSHIQALNNLNSMGMLSDMNSNDSSPFDINDFPQLTSRPNSAGGPQGQSGSLRKQGLGVSPMVQQNQEFSIQNEDFPALPGFKGGNTDYAMDMHQKEQLHENAVSMVQSQHFPMGRSSGFSLGGAYSSHRSQQQDAPSVSSVDVSFSSANNEELLHLHGSDIFPASHSTYNSQTSGASGIGLRPLNSPNTVSGMGSYDQLIQQYQRHQSQNQSQFRFQQMSTANQFFRDQGMKSFQTSQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFTVPRCYYVKQPPALNHGYFSKFTAETLFYIFYSMPKDEAQIYAANELYNRGWLYHKEEHFWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETIRKDNFVVHYELLEKPTPASSLRGKGNV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0170 736 FunFam probable NOT transcription complex subunit VIP2 isoform X1 549 730 - -
Lele32g0170 736 PANTHER CCR4 NOT-RELATED 109 723 IPR040168 GO:0030015
Lele32g0170 736 MobiDBLite consensus disorder prediction 329 374 - -
Lele32g0170 736 Pfam NOT2 / NOT3 / NOT5 family 599 721 IPR007282 GO:0006355
Lele32g0170 736 Gene3D - 549 732 IPR038635 -
Lele32g0170 736 MobiDBLite consensus disorder prediction 437 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0170 Lele-ChrLele32 983394 988508 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1220 11 19309342 19310226 Lele32g0170 32 983394 988508 CCT
Lele12g0100 12 840542 841029 Lele32g0170 32 983394 988508 CCT
Lele09g1222 09 21113395 21116350 Lele32g0170 32 983394 988508 CCT
Lele10g1197 10 23131388 23134648 Lele32g0170 32 983394 988508 CCT
Lele29g0181 29 1018552 1022318 Lele32g0170 32 983394 988508 hybridization
Lele30g1226 30 14990167 14993869 Lele32g0170 32 983394 988508 hybridization