Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0159 ATGTCTTCCAATTCCGATACGCCTGAGGATGATTCTTGGTTTTTGGAAGCACACAGGGCATCCTCAATCGCCATATTCTGTGTCATCTTCATCATACTAACATTCTACAGCATATTTCAGTGCTTCTTCTATGGTAACCCTCGCACTAGTTCCTCTAGAAACCGCGATTCAACGGGAGATTCGAACGAGCCCGATCACGATGATCATCATTCTATACAGATTCAAGGTCGTGGTTTAGAGTTGTGGGCCATATCATCTCTTCCGATGTCTCCGTTTAAGAAGAGTGAGGGAGAAGAAGAGAAGGGAAGCAACAGAGAGTGTGCGATATGCTTGGGGGAGTTTGAAGAAGGAGAATGGCTTAAGAGACTTCCAATCTGCGCCCACGTCTTCCATGTTTCTTGCATAACCATGTGGTTTCGATCTCACTCAAATTGTCCCCTCTGCAGATCTAATGTCATTGATGATCATCTGGCTCGTAGCTTGGACTGCTCTGCTTCGGCGCTTCTTACCACGCATCGCTAG 522 0.4636 MSSNSDTPEDDSWFLEAHRASSIAIFCVIFIILTFYSIFQCFFYGNPRTSSSRNRDSTGDSNEPDHDDHHSIQIQGRGLELWAISSLPMSPFKKSEGEEEKGSNRECAICLGEFEEGEWLKRLPICAHVFHVSCITMWFRSHSNCPLCRSNVIDDHLARSLDCSASALLTTHR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0159 173 SMART ring_2 107 148 IPR001841 -
Lele32g0159 173 Pfam Ring finger domain 106 149 IPR001841 -
Lele32g0159 173 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 153 IPR044675 -
Lele32g0159 173 MobiDBLite consensus disorder prediction 49 70 - -
Lele32g0159 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 155 IPR013083 -
Lele32g0159 173 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lele32g0159 173 SUPERFAMILY RING/U-box 96 155 - -
Lele32g0159 173 CDD RING-H2_EL5_like 106 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0159 Lele-ChrLele32 914767 915288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0159 23 152 C3H Transcription Factor Family AT1G04360 35.556 2.52e-21 87.4