Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0155 ATGCGAAAAGGTCCATGGACGGAACAGGAGGACATAAAACTGGTGTCTTTTGTGGGCTTGTTGGGAGACCGACGATGGGATTTTATTGCAAAGGTTTCAGGTTTGCATAGAACAGGTAAAAGTTGCCGGTTACGTTGGGTTAATTACCTTCATCCTGGTCTCAAACGGGGCAAGATGACACCCCAAGAAGAGCGTCTCGTCCTCGAGCTTCACTCCAAATGGGGAAATAGATGGTCAAAAATTGCTGGCAAATTACCAGGACGCACGGATAATGAGATTAAGAATTACTGGAGGACTCACATGAGGAAGATGGCTCAAGAGAAAAAGCGAGCAGCAGCGGCTTCATTATCGCCTTCATCATCATCATCATCATCATCATCAGCGTCCTCCAAGAACAGTTCTGGAGAAGAAGAAAGCTTTTATGATAAAGGAGGTCCTAATAACATGATGATATCTTCTTCCAGAGAGATACAGATCACTACAGGGGAAGAAGGGTACTCTATGGACGATTTATGGAAAGATATCGAAGCAGAAGAGAACAACAGTGAAGAGGGCCACAACTTGTCTTGTCCTTCATGGGAGTACTCTAGTTCAGAATCGGTATGGGTTATGGACGAAGAGGAAAGTCAGATTTTTAACCCATTTTTTCCCCAAGGAACACCATTTCTTTAA 672 0.439 MRKGPWTEQEDIKLVSFVGLLGDRRWDFIAKVSGLHRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHSKWGNRWSKIAGKLPGRTDNEIKNYWRTHMRKMAQEKKRAAAASLSPSSSSSSSSSASSKNSSGEEESFYDKGGPNNMMISSSREIQITTGEEGYSMDDLWKDIEAEENNSEEGHNLSCPSWEYSSSESVWVMDEEESQIFNPFFPQGTPFL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0155 223 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Lele32g0155 223 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lele32g0155 223 MobiDBLite consensus disorder prediction 113 135 - -
Lele32g0155 223 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 160 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele32g0155 223 Gene3D - 58 135 - -
Lele32g0155 223 SUPERFAMILY Homeodomain-like 2 97 IPR009057 -
Lele32g0155 223 CDD SANT 5 50 IPR001005 -
Lele32g0155 223 Gene3D - 3 55 - -
Lele32g0155 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Lele32g0155 223 Pfam Myb-like DNA-binding domain 56 100 IPR001005 -
Lele32g0155 223 Pfam Myb-like DNA-binding domain 3 50 IPR001005 -
Lele32g0155 223 CDD SANT 58 101 IPR001005 -
Lele32g0155 223 FunFam Myb transcription factor 3 55 - -
Lele32g0155 223 FunFam MYB transcription factor 58 130 - -
Lele32g0155 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Lele32g0155 223 MobiDBLite consensus disorder prediction 107 151 - -
Lele32g0155 223 SMART sant 55 103 IPR001005 -
Lele32g0155 223 SMART sant 2 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0155 Lele-ChrLele32 893942 894888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0155 2 211 MYB Transcription Factor Family AT5G59780 61.062 1.46e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele32g0155 Myb_DNA-binding 2.6e-14 CL0123